Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq10496 96.9 4e-15 seq14733 86.0 7e-12 >seq10496 Length=57948 Score = 96.9 bits (106), Expect = 4e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 164783 TTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATA 164842 |||||||| | || ||||||||||| | | ||||| ||||||||||||||| | || | Sbjct 39278 TTCATGATACTGTAGTTAATCAGTTATTGGCAAAAATTGATGGTGTAGAATCCCTCAACA 39337 Query 164843 ATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGAC 164902 ||||| || | | || ||||| || || ||| | |||||||| ||||| | ||| Sbjct 39338 ATATTCTAGTCATTGGAATGACTAATAGAAAGGATATGATTGATGAAGCTTTGATGAGAC 39397 Query 164903 CTGGTCGATTAGAATTGAAAATAGAAATAGG 164933 | ||| |||||||| | | || ||||| || Sbjct 39398 CCGGTAGATTAGAAGTACAGATGGAAATTGG 39428 Score = 89.7 bits (98), Expect = 6e-13 Identities = 141/200 (71%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 164502 AGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATT 164561 ||||| || || | | ||| |||||| || ||| |||||||| |||||||| || Sbjct 35755 AGGCTTAAAGCACGTGAGAGGCATTTTACTATTTGGTCCTCCTGGGACAGGTAAAACTTT 35814 Query 164562 AATGGCTCGATGCATTGCTCAAGCTTTTAAATC--GCGACCCGTTAAAATTGTTAATGGT 164619 ||||||||| |||| ||| || || | | || || |||||||| ||||| Sbjct 35815 AATGGCTCGTCAAATTGGGCAAATGTTGAATGCAAGAGAACCA--AAAATTGTAAATGGA 35872 Query 164620 CCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAG 164679 || | | || |||||||||| || ||||| ||||| ||| || ||| | | ||| Sbjct 35873 CCCCAGATCTTAGACAAATATGTTGGAGAGTCTGAAGCAAATATTCGAAGGCTTTTTGCT 35932 Query 164680 GAGGCTGAAGAAGAACAAAA 164699 || |||||||||||| |||| Sbjct 35933 GAAGCTGAAGAAGAAGAAAA 35952 >seq14733 Length=41167 Score = 86.0 bits (94), Expect = 7e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 6811 TGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATA 6870 |||||||| | ||| | |||||| || | ||| || ||||||||||| | ||||||| | Sbjct 24459 TGTTCTTTAAGAGCATCTATATGGTCAAGATATATGTGAGCATCTCCAACGGTATGAACA 24400 Query 6871 AATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAA 6930 || || || | ||| | |||| ||| ||||| | || ||||| | ||||| | Sbjct 24399 AAATCTCCAGTTTTGAGATCAGTGACTTTTGCAATCATATGAGTTAAAAGAGCATAGCTA 24340 Query 6931 GCTACATTAAAAGGTACACCTAATCCCATA 6960 |||| ||||| |||||||||| ||| || Sbjct 24339 GCTATGTTAAATGGTACACCTAGACCCTTA 24310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594529530177600