Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq2234 149 6e-31 seq9669 95.1 1e-14 >seq2234 Length=154088 Score = 149 bits (164), Expect = 6e-31 Identities = 174/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || ||||||||||| ||| | |||| ||| | ||| ||||| ||||| | || | Sbjct 10972 TTTGCATTCCTCCTCTCAGTCGGAGAACCAGGTGAAGAGTGGATTCTTTTTGGATATTGT 10913 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 |||| | ||| | ||| || ||||| ||||| ||||||| | || ||||||| Sbjct 10912 AATCTGAAAGAGTACGGCCATCTTCAAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGAT 10853 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 |||| || ||||| ||||| || | ||| || ||||| || ||| |||||| Sbjct 10852 CTGGTGGGATACCCTCTTTATCTTGAATCTTGGCCTTCACATTTTCGATTGTGTCACTAG 10793 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || |||| ||||||||||||||||| ||||| ||||||||||||||||| Sbjct 10792 GCTCCACTTCAAGAGTGATGGTTTTTCCAGTCAGAGTCTTCACAAAGATCTGCAT 10738 Score = 143 bits (158), Expect = 2e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||||||||| | | |||||||| | |||||||||||| || | |||||||| | Sbjct 12872 CCTCCTCTCAACCTGAGAACCAAGTGTAGAGTAGATTCCTTCTGGATATTATAATCTGAC 12813 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| || ||| || || ||||| || |||||||||| || ||||||||||| ||| Sbjct 12812 AAAGTTCTGCCATCTTCAAGTTGTTTACCAGCAAAGATTAACCTCTGCTGATCTGGGGGA 12753 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||||||||| || | ||||| || || || | | || ||| | || || Sbjct 12752 ATACCTTCTTTATCCTGGATTTTGGCTTTCACATTCTCAATTGTATCACTAGGTTCAACT 12693 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | ||||||||||| ||||| || ||||| ||||| || ||||||| Sbjct 12692 TCTAAGGTGATGGTTTTGCCAGTCAGGGTTTTAACAAAAATTTGCATGC 12644 Score = 132 bits (146), Expect = 4e-26 Identities = 174/239 (73%), Gaps = 4/239 (2%) Strand=Plus/Minus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || ||||||||||| | || || || || || |||||||| ||||| | ||| | Sbjct 11656 TTTGCATACCTCCTCTCAACCTCAGAACTAAATGTAATGTAGATTCTTTTTGGATGTTGT 11597 Query 94833 AATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTG 94890 |||| | || || || ||| |||| ||| || || |||| |||| || || || Sbjct 11596 AATCAG--AAAGAGTACGACCATCTTCCAACTGCTTACCAGCAAAAATTAGCCTCTGTTG 11539 Query 94891 ATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGC 94950 |||||| || |||||||||||||| | |||||| || |||||| | | |||||| Sbjct 11538 ATCTGGGGGGATACCTTCTTTGTCTTGAATTTTGGCTTTGACGTTTTCTATTGTGTCACT 11479 Query 94951 GTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 | || || || | ||||||||||| ||||| || |||||||| || || ||||||| Sbjct 11478 AGGCTCTACTTCCAAGGTGATGGTTTTGCCAGTTAGGGTTTTCACGAAAATTTGCATGC 11420 Score = 131 bits (144), Expect = 2e-25 Identities = 175/241 (73%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || |||||||| | || ||| |||||||| | || ||||||||||| | Sbjct 11889 AAAAATTTGCATGCCTCCTCTTAGTCTCAAGACCAAGTGAAGGGTTGATTCCTTTTGGAT 11830 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| || || || ||| ||| || ||||| || || |||||||||||| ||| Sbjct 11829 GTTGTAGTCCGACAGAGTACGTCCATCTTCTAGCTGCTTGCCCGCAAAGATTAATCGTTG 11770 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 ||||| ||||| |||||||| || || | |||||| || ||||| | | || || Sbjct 11769 TTGATCAGGAGGGATACCTTCCTTATCTTGAATTTTAGCTTTGACATTTTCAATTGTATC 11710 Query 94948 AGCGTGG-TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006 | | ||| || || || | || || || || |||||||||||||| || ||||| |||| Sbjct 11709 A-CTTGGCTCAACTTCTAGTGTAATTGTCTTCCCAGTAAGAGTTTTGACGAAGATTTGCA 11651 Query 95007 T 95007 | Sbjct 11650 T 11650 Score = 129 bits (142), Expect = 5e-25 Identities = 176/243 (72%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || |||||||| | || || |||| |||| ||||||||| ||||| | Sbjct 12117 AAAAATTTGCATGCCTCCTCTGAGTCTTAAAACCAGATGCAGAGTAGATTCTTTTTGAAT 12058 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||||||||| || ||| | ||| || || || || || |||| ||||| | || Sbjct 12057 GTTATAATCCGACAGAGTACGGCCATCTTCTAGTTGCTTACCAGCAAAAATTAAACGCTG 11998 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 ||||||||| ||||| ||||||||||| | |||||||| || || | | || || Sbjct 11997 CTGATCTGGGGGAATTCCTTCTTTGTCCTGGATTTTTGCTTTAACATTTTCAATGGTATC 11938 Query 94948 AGCGTGG-TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006 | | ||| ||||| || | || || ||||| || || ||||| || ||||| || |||| Sbjct 11937 A-CTTGGTTCGACTTCTAATGTAATTGTTTTACCTGTTAGAGTCTTTACAAAAATTTGCA 11879 Query 95007 TGC 95009 ||| Sbjct 11878 TGC 11876 Score = 118 bits (130), Expect = 9e-22 Identities = 178/249 (71%), Gaps = 3/249 (1%) Strand=Plus/Minus Query 94761 GTTTTTTAAAAT-TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCC 94819 ||||| |||| ||| || |||||||| | ||||| |||||||| | ||| ||||| Sbjct 11213 GTTTTGACAAATATTTGCATACCTCCTCTAAGTCGCAGAACCAAGTGAAGAGTGGATTCT 11154 Query 94820 TTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATT 94879 || || | || ||||| || ||| ||| || |||||||||||| | ||||| Sbjct 11153 TTCTGGATATTGTAATCAGACAGAGTACGACCATCTTCAAGCTGTTTTCCGGCGAAGATC 11094 Query 94880 AATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCG 94939 ||||| ||||| |||||||| || |||||||| || | ||||||| ||||| | Sbjct 11093 AATCTCTGCTGGTCTGGAGGGATGCCTTCTTTATCCTGGATTTTTGTTTTGACATTTTCT 11034 Query 94940 ACAGTGTCAGCGTGG-TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998 | ||||| || || || || || | ||| ||||| || || || ||||| || || || Sbjct 11033 ATTGTGTC-GCTAGGTTCAACTTCTAACGTTATGGTCTTCCCTGTCAGAGTCTTTACGAA 10975 Query 94999 GATCTGCAT 95007 || ||||| Sbjct 10974 TATTTGCAT 10966 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || ||||||||||| | ||| || || | || | ||| |||| |||||||| Sbjct 10706 GTGGATTCCTTTTGAATGTTGTAGTCCGAGAGGGTTCTTCCATCTTCCAATTGTTTTCCA 10647 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 ||||||| |||| ||| |||||||||||||| ||||||||||| | ||| || ||||| Sbjct 10646 GCAAAGATCAATCGTTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCCTTT 10587 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || | | || ||| | || || || | |||||||| || || || |||||| Sbjct 10586 ACATTTTCAATGGTATCACTAGGCTCAACCTCTAGAGTGATGGTCTTGCCGGTGAGAGTT 10527 Query 94991 TTCACAAAGATCTGCAT 95007 |||||||| |||||||| Sbjct 10526 TTCACAAAAATCTGCAT 10510 Score = 113 bits (124), Expect = 4e-20 Identities = 176/249 (71%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 94762 TTTTTTAAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTT 94821 |||| |||| | | || |||||||| |||| | || | || | ||||| || || Sbjct 12351 TTTTACAAAAATCTGCATCCCTCCTCTTAATCTGAGAACTAGATGGAGTGTAGACTCTTT 12292 Query 94822 TTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAA 94881 ||| | ||| ||||| || || ||| || |||||||| || |||| || | Sbjct 12291 TTGGATGTTGTAATCCGACAGGGTACGCCCATCTTCAAGCTGTTTACCAGCAAAAATCAG 12232 Query 94882 TCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGAC 94941 |||||||||||||| ||||| |||||||| || | |||||||| ||||| | | Sbjct 12231 CCTTTGCTGATCTGGTGGAATGCCTTCTTTATCTTGAATTTTTGTTTTGACATTTTCAAT 12172 Query 94942 AGTGTCAGCGTGG-TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGA 95000 || || || ||| || || || | |||||||| |||||||| || ||||| ||||| | Sbjct 12171 TGTATC-GCTTGGTTCTACTTCTAAGGTGATGGTCTTTCCAGTGAGGGTTTTAACAAAAA 12113 Query 95001 TCTGCATGC 95009 | ||||||| Sbjct 12112 TTTGCATGC 12104 Score = 98.7 bits (108), Expect = 9e-16 Identities = 123/167 (74%), Gaps = 4/167 (2%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || ||||||| | | ||| || | |||| ||| ||||| || || | Sbjct 12657 AAAAATTTGCATGCCTCCTCGGAGCCTCAAGACTAGATGCAGAGTTGATTCTTTCTGAAT 12598 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 |||||| || |||| ||| | ||| || || ||||| || | |||||||| || Sbjct 12597 GTTATAGTCCG--ATAGGGTTCGGCCATCTTCAAGTTGTTTACCTGCGAAGATTAACCTC 12540 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGAC 94932 |||||||||||||||||||||||||| || | |||||| || || || Sbjct 12539 TGCTGATCTGGAGGAATACCTTCTTTATCTTGAATTTTAGCTTTCAC 12493 >seq9669 Length=62194 Score = 95.1 bits (104), Expect = 1e-14 Identities = 99/128 (77%), Gaps = 4/128 (3%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||||| ||||| ||||| || |||||||| |||||||| | ||| || || Sbjct 58791 CCACCTCTCAGGCGCAAGACCAAATGTAAAGTAGACTCCTTTTGAATGTTGTAGTCAG-- 58734 Query 94841 ATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | || ||| | || |||| ||| ||||| |||| ||||||||||||||||| |||| Sbjct 58733 AAAGAGTTCGTCCTTCTTCCAACTGCTTTCCAGCAAAAATTAATCTTTGCTGATCAGGAG 58674 Query 94899 GAATACCT 94906 |||||||| Sbjct 58673 GAATACCT 58666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447281222340960