Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_006552.1 Length=65195 Score E Sequences producing significant alignments: (Bits) Value seq32920 408 2e-109 seq11269 390 5e-104 seq164795 187 1e-42 seq4461 150 7e-32 seq10932 143 1e-29 seq34866 114 5e-21 seq50 111 7e-20 seq79806 98.7 4e-16 >seq32920 Length=14210 Score = 408 bits (452), Expect = 2e-109 Identities = 272/300 (91%), Gaps = 3/300 (1%) Strand=Plus/Minus Query 61765 GTAGACTACGGCCTTTTCCTACAAGGGGCGC-GACATGCTGGTGATTCGATTGGCGGGGA 61823 |||||||||||||||||||||| || || | |||||| ||||||| |||||||||| Sbjct 486 GTAGACTACGGCCTTTTCCTAC--GGAGCTTAGTGATGCTGTTGATTCGGTTGGCGGGGA 429 Query 61824 AGTGGACGCTGAAGCTCGACAGGCAGGTCGGCAGTTCCGGCAAGCACGGGATATGGGCAT 61883 |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 428 AGTGGACGCTGAAGCTCGACAGGCAGATAGGCAGTTCCGGCAAGCACGGGATATGGGCAT 369 Query 61884 TCCACTGCTCTGAAAGCACTTTCGCGCCGTCTTCGAACGACCTCCGGCGCACTGCGGCGA 61943 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 368 TCCACTGCTCTGAAAGCACTTTCGCGCCGTCTTCGAACGACCTGCGGCGCACTGCGGCGA 309 Query 61944 TCCTTCCAGCCGAGCCCAAAGAGGGCCAGGCAGTGGAAGTGTCGATCTGCGAAAGCCCGC 62003 ||||||||||||||||||| || |||||| | ||||| || ||||||||||| | | ||| Sbjct 308 TCCTTCCAGCCGAGCCCAAGGAAGGCCAGACGGTGGACGTATCGATCTGCGACACCGCGC 249 Query 62004 ACTCGCCGGATGGATGGATCGCCGTCGGCTCAGGCGTCGCCGCTTACGAAGCGGAGCGCT 62063 ||||||||||||| ||||| |||||||| |||||||| || |||||||| |||||||||| Sbjct 248 ACTCGCCGGATGGGTGGATTGCCGTCGGATCAGGCGTAGCGGCTTACGAGGCGGAGCGCT 189 >seq11269 Length=54388 Score = 390 bits (432), Expect = 5e-104 Identities = 236/249 (95%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 16889 CCCGGCGAACCGGGGCGGGTTGCTTAGCAGGGCCGCAGTTCTGTGCAGTCCGTAGAAGGG 16948 ||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||| Sbjct 53672 CCCGGCGAACCGGGGCGGGGTGCTTAGCAGGGCCGCAGTTCTGTGCAGTCCATGGAAGGG 53731 Query 16949 GCGCCTACCAGGATGCGGCGGGAAATTTCACCGTAGGCCTGGGGGAAGTGCTGGAACAGC 17008 |||||||||| |||||||||||||||||||||||||||||| ||||||||||| | |||| Sbjct 53732 GCGCCTACCACGATGCGGCGGGAAATTTCACCGTAGGCCTGCGGGAAGTGCTGCATCAGC 53791 Query 17009 TCGTTGGCCTCCTCTTGGGTCTCAGCTTCGAAAGCCGGATGCCAATAGGGCGGGCTATCG 17068 |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct 53792 TCGTTGGCTTCCTCTTGGGTCTCAACTTCGAAAGCCGGATGCCAATAGGACGGGCTATCG 53851 Query 17069 CCATACTTGACTTCGATCATGAGGTGGAATGCTTGAGCTTGAGTGCTCATCGTCTTGCCC 17128 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 53852 CCATATTTGACTTCGATCATGAGGTGGAATGCTTGAGCTTGAGTGTTCATCGTCTTGCCC 53911 Query 17129 TCCAGTGCG 17137 ||||| ||| Sbjct 53912 TCCAGGGCG 53920 >seq164795 Length=1075 Score = 187 bits (206), Expect = 1e-42 Identities = 251/344 (73%), Gaps = 9/344 (3%) Strand=Plus/Plus Query 11165 CCGCCGAGCAGTTGCATGTTGCCGTTGATGTCGACCACTACCTCGGTGCTGTAGTGGTCC 11224 ||||||||||| |||||| |||| | |||||||| | | |||||| |||| | | Sbjct 312 CCGCCGAGCAGCTGCATGGTGCCCTGCATGTCGACGATGATTTCGGTGGTGTAACGCTTG 371 Query 11225 TGGCCGTCCTGGCCCTGCCACTTGCGGGTGCGTAGGCTGCCTTCGATGTAGACCTGGGAG 11284 ||||||| || |||| |||||| | || |||| |||||||| ||||| || Sbjct 372 ATACCGTCCTTTTCC---CACTCGCGGGTCTGCAGCTTGCCCTCGATGTACACCTGCGAA 428 Query 11285 CCCTTTCGCAGGTATTGCGCTGCGATTTCGGCCAGCCGGCCAAAGAGCACGACCCGGTGC 11344 ||||| |||||||||| | ||||| ||||| | | ||| || || | || |||||| Sbjct 429 CCCTTGCGCAGGTATTCGCCGGCGATCTCGGCGACCTTGCCGAACAGGGCAACGCGGTGC 488 Query 11345 CACTCGGTGCGCTCCTGCTGCTGGCCGGTCTGCTTGTCTTTCCAGCTTTCGCTAGTGGCC 11404 |||||||| ||| || ||| |||||||||||||| |||| ||||| |||||| Sbjct 489 CACTCGGTCTTCTCGACCTTCTGACCGGTCTGCTTGTCGGTCCACTGCTCGCTGGTGGCC 548 Query 11405 AGACTGAGGGAGGTGACCGCCTTTCCGCCCGG--GGTAGATCTTGCGTCTGGATCCTGGC 11462 || || ||| ||||||||| || |||| || ||||| | || || || ||||||| Sbjct 549 AGGCTCAGGTTGGTGACCGCATTGCCGCTGGGCAGGTAG--CGTGTTTCCGGGTCCTGGC 606 Query 11463 C-CAGATGGCCGACCAGGATTACCTTGTTCACTCCGCGTGCCAT 11505 | ||| | ||||||||| || || ||||| || || || ||||| Sbjct 607 CGCAGGT-GCCGACCAGAATGACTTTGTTAACCCCACGGGCCAT 649 >seq4461 Length=107335 Score = 150 bits (166), Expect = 7e-32 Identities = 218/302 (72%), Gaps = 13/302 (4%) Strand=Plus/Plus Query 11206 CTCGGTGCTGTAGTGGTCCTGGCCGTCCTG---GCCCTGCCACTTGCGGGTGCGTAGGCT 11262 ||||||||||||| ||||||| ||| ||| | |||||||||||||||| | || Sbjct 83980 CTCGGTGCTGTAGCGGTCCTGCCCGGTCTGCTTGTCCTGCCACTTGCGGGTATGCAGCGA 84039 Query 11263 GCCTTCGATGTAGACCTGGGAGCCCTTTCGCAGGTATTGCGCTGCGATTTCGGCCAGCCG 11322 ||| |||| || | || ||||||||| |||||||||| | |||||||| ||||| || Sbjct 84040 GCCCTCGAGATAAATCTTGGAGCCCTTGCGCAGGTATTCACCGGCGATTTCCGCCAGGCG 84099 Query 11323 GCCAAAGAGCACGACCCGGTGCCACTCGGTGCGCTCCTGC--TGCTGGCCGGTCTGCTTG 11380 || ||| || || || ||||| || || |||||||| ||| ||||| | |||| Sbjct 84100 ACCGTAGAAAACCACGCGATGCCATTCCGTCTGCTCCTGCATGGCT--CCGGTATTCTTG 84157 Query 11381 TCTTTCCAGCTTTCGCTAGTGGCCAGACTGAGGGAGGTGACCGCCTTTCCGCCCG-GGGT 11439 || |||||| ||||| || |||| ||| || |||||| ||||| | || Sbjct 84158 TCCCGCCAGCTCTCGCTGGTAGCCACGGTGACATTGGCGACCGC---GCCGCCGGACGGC 84214 Query 11440 AGAT--CTTGCGTCTGGATCCTGGCCCAGATGGCCGACCAGGATTACCTTGTTCACTCCG 11497 |||| | | || ||||| | ||||||| ||||||||| || |||||||| || || Sbjct 84215 AGATAACGGACTTCGGGATCACGCCCCAGATTGCCGACCAGAATGACCTTGTTTACACCA 84274 Query 11498 CG 11499 || Sbjct 84275 CG 84276 >seq10932 Length=55943 Score = 143 bits (158), Expect = 1e-29 Identities = 138/176 (78%), Gaps = 6/176 (3%) Strand=Plus/Plus Query 8424 ACGCGGAACAGGTTCACCACGTCCCCGTCGAGGTCGTTGTAGACCTCGGCGTAGCTGCGG 8483 ||||||||||| ||||| | ||| ||||||||||||||||||||||| |||||| ||| Sbjct 8012 ACGCGGAACAGATTCACTATGTCGCCGTCGAGGTCGTTGTAGACCTCAGCGTAGGCGCGT 8071 Query 8484 GCCTTCCGCAGCAGGACAGAAGCCGCGCCGCCGAAAGGCTCGATGTAG---GTGTGGTGG 8540 | ||| ||| ||||| | | || ||||| |||||||||| |||| ||||| | | Sbjct 8072 GGTTTCTGCATTAGGACGCCACCGGCACCGCCAAAAGGCTCGACGTAGCACGTGTGCTCG 8131 Query 8541 GGCGCGAGGTGCTGGATGATCCACGGGGCGAGCAGCCACTTGCCGCCGTGGTAGCG 8596 ||| ||||| | |||||||||||| || || | |||||| |||||||||||| Sbjct 8132 GGC---AGGTGTTCGATGATCCACGGCGCCAGGCGAAACTTGCTGCCGTGGTAGCG 8184 Score = 114 bits (126), Expect = 5e-21 Identities = 240/358 (67%), Gaps = 0/358 (0%) Strand=Plus/Plus Query 11749 GTTGGCCGCATCCTCGTCCTGGTAGCGCATCAGCGCGATGCGAGTGATACGGTCGTCGAA 11808 ||| || || ||||| | | ||||||| ||| |||||||| |||||||| ||||| Sbjct 10235 GTTTGCTGCTTCCTCACCGCGATAGCGCACCAGGGCGATGCGCAGAATACGGTCATCGAA 10294 Query 11809 GCTGATGTTGTGCGCCGCGCGGCGGGCTGCGCGGCCGTTGATCGCAAGAAAGCCCTCCAG 11868 | ||||||||| ||| || | ||||| ||| || || || ||||| ||||| Sbjct 10295 CGGCAGGTTGTGCGCGATGCGCAGGCCGGCGCGTTCGTGAATGGCCAGGAAGCCTTCCAG 10354 Query 11869 AGCCTCGGCCTCGCTGATGCCAACATCCATCGCCTGTTCGTGGCTGATGCCGTGGATCGC 11928 || || || ||| || |||| |||||| ||| |||| | ||||||| ||||| || Sbjct 10355 TGCTTCAGCTTCGGGAATCCCAAGATCCATAGCCATCTCGTTGGTGATGCCATGGATTGC 10414 Query 11929 GGTCATTTCGGGGGTGATTTCCCAGCCGTTGGGTCGCACGATCGCCTCAAAGCGATCGAT 11988 | ||| | || ||||||| | |||| | ||| ||||| |||| || | Sbjct 10415 CGCTGCCTCGTCAGGAATCACCCAGCCATCGGGTTTGATGATGGCCTCGAAGCTGTCCAC 10474 Query 11989 GGTGTTGCCGGCGGCATCGCAGAGCAGAGCGGCAACTTCCACGATGTGGGGCTGGCACGG 12048 ||||| | ||| |||||| ||||| | || || | ||||||||||| ||| Sbjct 10475 CAGATTGCCTTGCTCGTCGTGGAGCAGGGCGGCGATATCGACCAGGTGGGGCTGGCGCGG 10534 Query 12049 GTCTTCACTGGGCAACTTCCACTCGGGAATACCCGTCGTTTCGAAGTCGAAAATGTTG 12106 || | || || || || |||| ||| || |||||| |||||| | |||| Sbjct 10535 ATCGTTGCTTGGTTCTTTGAACAGCGGAAAACCGGTTGTTTCGGTGTCGAATACGTTG 10592 Score = 86.0 bits (94), Expect = 3e-12 Identities = 184/263 (70%), Gaps = 29/263 (11%) Strand=Plus/Plus Query 3798 GGTCGCTCATGGCGTCACCCGCTTGAACTCGACGACCCAGACCCATGGGTTTGCGGCCCA 3857 || || ||||||||||||||||||||||||||||||||||||||| ||||| || |||| Sbjct 1678 GGGCGTTCATGGCGTCACCCGCTTGAACTCGACGACCCAGACCCAGGGGTTGGCATCCCA 1737 Query 3858 GCTTCCCTCGCCGTTGAGCGATTCCCAGAGGAAGCCGAACGCCCCCTTGGCT--GTGTCG 3915 | || | ||||| || || | ||| || || ||| ||| | ||| | |||| Sbjct 1738 G--TCGC-CGCCGGTG---GAGTTCCACAGTTCGCGGAAGGCCGC--TGGATACCAGTCG 1789 Query 3916 CCCCAG--CAGC-CGATATCGGCGCAGGCTTGCCGAGCGTGGTCGCATGGCTCGCCGCGC 3972 | || | || ||||||| | | ||| ||| || ||| || || Sbjct 1790 CGGTAGTTCGGCGAGATATCGTCAC-----TGCGCAGC----TC---AGGCGGGCACAGC 1837 Query 3973 ACTCCCTCTGCCAACGCCTG-CTCTTCG-CTGATGTCCTGCAGCCGCTCGACGCGTACGT 4030 | || || ||| || || | || || |||||||||||| ||||||||||| || Sbjct 1838 AGGCCTTCGGCC--CGGATGTCGCTGCGAGTGATGTCCTGCAAGCGCTCGACGCGCACAG 1895 Query 4031 CGGTGATCTCAAGCAGGATGCGG 4053 |||||||||| |||||||||||| Sbjct 1896 CGGTGATCTCCAGCAGGATGCGG 1918 >seq34866 Length=13211 Score = 114 bits (126), Expect = 5e-21 Identities = 231/343 (67%), Gaps = 0/343 (0%) Strand=Plus/Plus Query 11165 CCGCCGAGCAGTTGCATGTTGCCGTTGATGTCGACCACTACCTCGGTGCTGTAGTGGTCC 11224 ||||| | || |||||| | ||| ||||| ||||| | || || |||| | || Sbjct 5612 CCGCCTAACATTTGCATTTGACCGCCCATGTCTACCACGATTTCTGTAGTGTATTTTTCT 5671 Query 11225 TGGCCGTCCTGGCCCTGCCACTTGCGGGTGCGTAGGCTGCCTTCGATGTAGACCTGGGAG 11284 ||||| || | ||| || || || ||| | ||||||||||| || || || Sbjct 5672 TGGCCTGATTGATCAGTCCATTTACGCGTTTGTAAACGACCTTCGATGTACACTTGTGAA 5731 Query 11285 CCCTTTCGCAGGTATTGCGCTGCGATTTCGGCCAGCCGGCCAAAGAGCACGACCCGGTGC 11344 || || || ||||||| | || | ||| || || |||||| | |||||| |||||| Sbjct 5732 CCTTTACGAAGGTATTCACCAGCAACTTCTGCTAGTTTGCCAAATAACACGACACGGTGC 5791 Query 11345 CACTCGGTGCGCTCCTGCTGCTGGCCGGTCTGCTTGTCTTTCCAGCTTTCGCTAGTGGCC 11404 || || || ||||| ||| || || || | || ||||||||||| || | || || Sbjct 5792 CATTCAGTACGCTCTTGCATTTGCCCTGTGTTTTTATCTTTCCAGCTATCTGTCGTAGCA 5851 Query 11405 AGACTGAGGGAGGTGACCGCCTTTCCGCCCGGGGTAGATCTTGCGTCTGGATCCTGGCCC 11464 | |||| | || | || || || || | | | | |||||||| ||||| Sbjct 5852 ATGCTGATATTCGCTACGCCATTGCCATTAGGCATATAACGTACTTCTGGATCTTGGCCT 5911 Query 11465 AGATGGCCGACCAGGATTACCTTGTTCACTCCGCGTGCCATGG 11507 | || || |||| ||| || |||||||| ||||||||||||| Sbjct 5912 AAATTACCAACCAAGATAACTTTGTTCACACCGCGTGCCATGG 5954 >seq50 Length=481860 Score = 111 bits (122), Expect = 7e-20 Identities = 207/303 (68%), Gaps = 6/303 (2%) Strand=Plus/Minus Query 11207 TCGGTGCTGTAGTGGTCCTGGCCGTCCTGGCCCTGCCACTTGCGGGTGCGTAGGCTGCCT 11266 |||||| |||| | || ||| | ||| |||||||||| ||||| || ||||| Sbjct 154948 TCGGTGGTGTAACGCTCTACGCCTTGCTGATCCTGCCACTTACGGGTTTTCAGCTTGCCT 154889 Query 11267 TCGATGTAGACCTGGGAGCCCTTTCGCAGGTATTGCGCTGCGATTTCGGCCAGCCGGCCA 11326 ||||| || |||| ||||| || ||||| |||| | || ||||| ||||| || Sbjct 154888 TCGATATACACCTTAGAGCCTTTACGCAGATATTCGCCGGCAATTTCTGCCAGACGCTGG 154829 Query 11327 AAGAGCACGACCCGGTGCCACTCGGTGCGCTCCTGCTGCTGGCCGGTCTGCTTGTCTTTC 11386 | | |||||||||||||| ||||| |||| | | | |||||| || |||||| Sbjct 154828 TAAATTACGACCCGGTGCCATTCGGTTTGCTCTTTCATTTCGCCGGTAGCTTTATCTTTC 154769 Query 11387 CAGCTTTCGCTAGTGGCCAGACTGAGGGAGGTGACCGCCTTTCCGCC---CGGGGTAGAT 11443 |||||||| || || | || ||| | ||| || ||||| ||| || | Sbjct 154768 CAGCTTTCAGAGGTCGCAATGCTCAGGTTAGCGACGGC---GCCGCCCTGCGGCATATAA 154712 Query 11444 CTTGCGTCTGGATCCTGGCCCAGATGGCCGACCAGGATTACCTTGTTCACTCCGCGTGCC 11503 | | || |||||||||||||||| |||| | || || ||||| | ||| || ||| Sbjct 154711 CGGACTTCCGGATCCTGGCCCAGATTACCGATTAAAATGACTTTGTTAATTCCACGCGCC 154652 Query 11504 ATG 11506 ||| Sbjct 154651 ATG 154649 >seq79806 Length=4446 Score = 98.7 bits (108), Expect = 4e-16 Identities = 81/96 (84%), Gaps = 2/96 (2%) Strand=Plus/Minus Query 9070 GATCAGCAGGGTGTCG-GAGCCTGAGTCGAACTCCACCTTGGTGCCGAGGAGGTGTGCCT 9128 |||| |||| |||||| | ||| |||| |||| | | ||| ||| || ||||| |||| Sbjct 95 GATCTGCAGCGTGTCGCGCTCCTC-GTCGTACTCGATCCTGGAGCCCAGCAGGTGCGCCT 37 Query 9129 CGAAGCTGATCGACAGGCCTTCGGCGCGGCCGGTGA 9164 |||||||||||||||||||||||||||||||||||| Sbjct 36 CGAAGCTGATCGACAGGCCTTCGGCGCGGCCGGTGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 208041205184176