Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2931 214 3e-51 seq9692 95.1 2e-15 >seq2931 Length=135275 Score = 214 bits (236), Expect = 3e-51 Identities = 212/273 (78%), Gaps = 1/273 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 ||||| |||||||| | | |||||||||||| |||||||| ||||||||||| || ||| Sbjct 116292 GCTAAACGTCATCGTAAAGTTCTTCGAGATAATATCCAAGGTATCACCAAGCCTGCCATC 116351 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| ||||| ||||||||||| |||||| | ||||| ||| | |||||||| | Sbjct 116352 CGTCGTCTTGCTCGCCGTGGTGGAGTGAAGCGTATTTCTGGTTTGATTTATGAAGAAACC 116411 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||| ||||| | ||||| | | ||| || | ||||||| | ||| || ||| Sbjct 116412 CGTGGTGTATTGAAAGTGTTCCTTGAAAACGTAATTCGTGATGCTGTAACCTACACTGAG 116471 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| ||||| || || || || | |||||| | || ||||| ||||||||||||| Sbjct 116472 CACGCCAAACGGAAAACCGTAACGGCTATGGATGTAGTGTATGCTCTGAAACGTCAAGGT 116531 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705 |||| | |||||||| || | ||| ||||| Sbjct 116532 CGTACCCTGTATGGTTTCGGTGGATAA-CTTCT 116563 >seq9692 Length=62009 Score = 95.1 bits (104), Expect = 2e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 16465 CATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCG 16524 |||||| || ||||| ||||| || ||| | ||| |||| | ||||| ||||| || || Sbjct 16399 CATCCAGGGTATCACGAAGCCTGCGATCAGGCGTTTGGCCAGACGTGGAGGAGTGAAACG 16458 Query 16525 TGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584 | |||| || || | || ||||| | || | || ||||| | ||| | | | ||| Sbjct 16459 TATCTCCGGTCTGATTTACGAAGAAACCCGAGGCGTGTTGAAAGTTTTCTTGGAAAACGT 16518 Query 16585 TATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGA 16644 |||| ||||| || || ||||||||||| || | || || || || ||||||| Sbjct 16519 GATCCGAGATGCCGTCACTTACACCGAGCACGCCAAGAGGAAAACCGTAACTGCCATGGA 16578 Query 16645 TATCGTCTATGC 16656 |||||||||| Sbjct 16579 CGTCGTCTATGC 16590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78910408963548