Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq16663 84.2 4e-12 seq147896 82.4 1e-11 >seq16663 Length=35617 Score = 84.2 bits (92), Expect = 4e-12 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 4620 AGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAATGAATAATGCGGTTTTTGGAAA 4679 |||| |||| || ||||| ||||| || || ||||||||||||||||| ||||||| || Sbjct 20286 AGCTGAGAACGAATTCGAGAAAAATTTCTACAAATTAATGAATAATGCAATTTTTGGGAA 20227 Query 4680 GACGATGGAGAATGTACGAAA 4700 |||||||| || ||||||| Sbjct 20226 AACGATGGAAAACATACGAAA 20206 >seq147896 Length=1182 Score = 82.4 bits (90), Expect = 1e-11 Identities = 141/204 (69%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 4500 AAATTTGAAACAATGTTTAGATTTAGGTTTAGTTCTTAAGAAAATACACCTAGTCTTGAA 4559 |||||| | | ||| |||| |||||||||||||| | || || | || | | || | Sbjct 51 AAATTTAAGAGAATATTTAAATTTAGGTTTAGTTTTGAAAAAGGTGCATAAAATTTTAGA 110 Query 4560 ATTTGAGCAATCAGACTGGCTCAAATCATATATCGATAAAAATACCGCATGCCGAAAACT 4619 ||| | |||| | |||||| || | || || | | || || | ||| | Sbjct 111 ATTCCATCAATAATCCTGGCTTCAACCGTAGATAAACAGGAACACACAGTTCCGTACTGA 170 Query 4620 AGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATT--AATGAATAATGCGGTTTTTGGA 4677 |||| | ||||| || || ||||| ||||| ||||| ||||||||| || | ||||| Sbjct 171 AGCTGAAAATGAATTTGAGAAAAATTTTTACAAATTAAAATGAATAACGCTATCTTTGGG 230 Query 4678 AAGACGATGGAGAATGTACGAAAA 4701 || || |||||||| |||||||| Sbjct 231 AAAACAATGGAGAACATACGAAAA 254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97764705146744