Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_006884.2 Length=178249 Score E Sequences producing significant alignments: (Bits) Value seq100896 82.4 9e-11 >seq100896 Length=2131 Score = 82.4 bits (90), Expect = 9e-11 Identities = 208/313 (66%), Gaps = 25/313 (8%) Strand=Plus/Plus Query 162772 GTTAACATCCTTGAAGGCATTCGTTTCTATGTTTCCTTTGCGTGTTCGTTTGCTTTTGGC 162831 ||||||||| | |||| |||||||||||||| |||||| ||||| |||||||| | Sbjct 1127 GTTAACATCTTAGAAGCGATTCGTTTCTATGTAAGCTTTGCTTGTTCATTTGCTTTCGCT 1186 Query 162832 GAGAACAAACTTATGGAAGGTTCAGCAAAGATCTTATCTCTTATCTCTAGAGATGAAAGT 162891 ||| || | ||||||||| ||||| ||| | || ||| | | |||||| Sbjct 1187 GAGCGTGAATTGATGGAAGGTAATGCAAAAATCATCAAGCTAATCGCCCGTGATGAAGCG 1246 Query 162892 CAACACTTGGTTATCACACAACAGATCTTGAAGAAGTGGGCAGATGGT---GACGATCCA 162948 |||||| | |||||| || |||||||| | | ||| ||| ||||| ||| Sbjct 1247 TTACACTTATCTGGCACACAGCACATCTTGAACATTATGCAAGAAGGTAAAGACGACCCA 1306 Query 162949 GAAAT-GCAAGAGAT--AGCAAA------AGAAGAA--AAGTCTTTTGTTAAAGATATGT 162997 ||||| |||| | | |||| | |||||| || || |||| | | Sbjct 1307 GAAATGGCAATCGTTGCAGCACAGTGTCGTGAAGAAGCAATTC---------AGATGTTT 1357 Query 162998 TTAGAAACACTGTTAATGAAGAGAAAGCATGGGCAGATTACTTGTTTAAAGAAGGATCTA 163057 | ||| || | | |||| |||| |||||||| ||| |||| || || || |||| Sbjct 1358 GTTGAAGCA--GCAGAACAAGAAAAAGATTGGGCAGAATACCTGTTCAAGGATGGTTCTA 1415 Query 163058 TGATAGGTCTAAA 163070 |||| ||||| || Sbjct 1416 TGATTGGTCTTAA 1428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568984012907040