Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_006938.1 Length=63649 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 1e-15 seq379 87.8 7e-13 >seq1 Length=1655743 Score = 96.9 bits (106), Expect = 1e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 7927 GACGAGTGTTCGATGGTCGACATGCAGGTCGGTCAAGACCTCCTCTCCTTCGACGTCCCC 7986 |||||| |||||||||| | | || | | | ||||| | ||||| | || Sbjct 176621 GACGAGGTGTCGATGGTCGGCGAGGAGATGGCGCGCGACCTGATGAGCTTCGGCAAGCCG 176562 Query 7987 ATCCTCGTGCTCGGCGACCCGGCCCAGCTCCCGCCCGTCATGGGAGGTGGCTTCTTCACG 8046 ||||||||||||||||| || | |||| | ||||| || ||| | ||| |||||| Sbjct 176561 ATCCTCGTGCTCGGCGATCCTGGCCAGTTGCCGCCGATCCGGGGCGAAGGCGCCTTCACC 176502 Query 8047 GAGGCCAAGCCGGACATGATGCTGACGGACATCCACCGCCAGGCCAAGGACAACCCCATC 8106 | | |||||||| |||||||||| || ||||||||||||||| || | | ||||| Sbjct 176501 CGCGACGAGCCGGACGTGATGCTGACCGAGATCCACCGCCAGGCCGCCGAGAGCGCCATC 176442 Query 8107 ATC 8109 ||| Sbjct 176441 ATC 176439 >seq379 Length=288837 Score = 87.8 bits (96), Expect = 7e-13 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 9399 CTCTGGGAGATGATCATGCGGTCCACGTGGGACTGGGCCGAGCCCGGCACCCTGTTCATC 9458 || ||| | | ||||||||| ||| | || | || || ||||| | |||||| Sbjct 226846 CTGTGGAACAAGATCATGCGCAACACTTATGATTTCGCGGAACCCGGTGTGATCTTCATC 226787 Query 9459 GACCAGATCAACCGCATGAACAATCTCAAGTACTGCGAGACCATCGCCGCCACCAATCCC 9518 |||| |||||| ||||||||||| || || ||||||||||||||||| ||| Sbjct 226786 GACCGCATCAACAAGATGAACAATCTGGGTTATGTGGAAACCATCGCCGCCACCAACCCC 226727 Query 9519 TGCGGCGAGCAGCCCCTCCCACCGTACGGTGCCTGCCTCTTGGGCTCCTTCAACCT 9574 || || || ||||| || || || || || |||||||| |||| || |||| || Sbjct 226726 TGTGGGGAACAGCCGCTGCCGCCCTATGGCGCCTGCCTGCTGGGGTCGGTCAATCT 226671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 203104872333560