Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_006949.1 Length=46900 Score E Sequences producing significant alignments: (Bits) Value seq50 113 1e-20 >seq50 Length=481860 Score = 113 bits (124), Expect = 1e-20 Identities = 137/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 32969 TGGTCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGAGCCTTTTCGC 33028 || |||||||| || | || || |||||||| | ||| |||| ||||||||| ||| Sbjct 154921 TGATCCTGCCACTTACGGGTTTTCAGCTTGCCTTCGATATACACCTTAGAGCCTTTACGC 154862 Query 33029 AGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATCACCACACGGTGCCACTCCGTC 33088 ||||| |||| ||||||||||||||| | | || || || |||||||| || || Sbjct 154861 AGATATTCGCCGGCAATTTCTGCCAGACGCTGGTAAATTACGACCCGGTGCCATTCGGTT 154802 Query 33089 TGCTCCTTTTGCTCGCCAGTATTTTTATCTCGCCATTGTTCTGACGTAGCTATTGTCAGG 33148 ||||| || ||||| ||| ||||||| ||| ||| || || || || ||||| Sbjct 154801 TGCTCTTTCATTTCGCCGGTAGCTTTATCTTTCCAGCTTTCAGAGGTCGCAATGCTCAGG 154742 Query 33149 TTAGCGA 33155 ||||||| Sbjct 154741 TTAGCGA 154735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149637443661584