Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq5205 152 6e-32 seq23 149 7e-31 seq82400 122 1e-22 seq6649 104 3e-17 seq7 96.9 4e-15 seq379 91.5 2e-13 >seq5205 Length=97750 Score = 152 bits (168), Expect = 6e-32 Identities = 218/307 (71%), Gaps = 0/307 (0%) Strand=Plus/Minus Query 6915 TTGCTTTATGCCCATGTGTTAAATGACCACCGCAATCCAAAGACATCGCCAATACTGAAT 6974 || ||||| || || || || ||||||||| | | || ||| | || |||| || Sbjct 29834 TTACTTTAGCACCGTGCGTCAAGTGACCACCGTGAGCTAAGCTCATACCTAAAACTGTAT 29775 Query 6975 CGCCTGGACTCAGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGTT 7034 ||||||| | || | ||| |||||||| |||||| |||||||| | ||| |||| Sbjct 29774 CGCCTGGGTTAAGAAGCGCTAAATAAACAGCAGAGTTTGCTTGTGAACCAGCATGTGGTT 29715 Query 7035 GAACGTTTGCGAAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGA 7094 |||||||||| | | || ||||| |||| ||||| ||||| || || | |||| Sbjct 29714 GAACGTTTGCATAGTCAGCACCAAACAACGCTTTTGCACGATCAATGGCAAGTTGTTCGA 29655 Query 7095 TCTCATCGGCTTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACT 7154 | || | | | |||||||||||||||| |||||||| ||||| || || ||||| | Sbjct 29654 TGATGTCAACATATTCACAACCGCCGTAATAGCGTTTGCCAGGATAACCTTCTGCATATT 29595 Query 7155 TGTTGGTAAAAATAGAACCTTGCGCTTTCATAACATCATCGGACACATAGTTTTCGGATG 7214 | || |||| | || ||||| |||| ||| ||| | | || ||||||||| || | Sbjct 29594 TATTCGTAAGTTTTGAGCCTTGAGCTTCCATTACAGCTTTAGAGCAATAGTTTTCAGAAG 29535 Query 7215 CAATCAA 7221 |||| || Sbjct 29534 CAATTAA 29528 >seq23 Length=559261 Score = 149 bits (164), Expect = 7e-31 Identities = 217/307 (71%), Gaps = 0/307 (0%) Strand=Plus/Minus Query 6915 TTGCTTTATGCCCATGTGTTAAATGACCACCGCAATCCAAAGACATCGCCAATACTGAAT 6974 || ||||| || || || || ||||||||| | | || ||| | | ||||| || Sbjct 225370 TTACTTTAGCACCGTGAGTCAAGTGACCACCGTGAGCTAAGCTCATACCAAGTACTGTAT 225311 Query 6975 CGCCTGGACTCAGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGTT 7034 | ||||| | || | ||| || ||||| |||||| |||||||| | || |||| Sbjct 225310 CACCTGGGTTGAGAAGCGCTAAATACACAGCAGAGTTTGCTTGTGAACCTGCGTGTGGTT 225251 Query 7035 GAACGTTTGCGAAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGA 7094 |||||||||| ||| || |||| | |||| ||||| |||||||| || | || | Sbjct 225250 GAACGTTTGCATAATCAGCACCGAACAATGCTTTCGCACGGTCAATTGCAAGTTGTTCAA 225191 Query 7095 TCTCATCGGCTTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACT 7154 | | || | | | |||||||||| ||||| |||||||| ||||| || || ||||| | Sbjct 225190 TTACGTCAACATATTCACAACCGCCATAATAGCGTTTGCCAGGATAACCTTCTGCATATT 225131 Query 7155 TGTTGGTAAAAATAGAACCTTGCGCTTTCATAACATCATCGGACACATAGTTTTCGGATG 7214 |||| |||| | || ||||| |||| |||||| | || ||||||||| |||| Sbjct 225130 TGTTCGTAAGTTTTGATCCTTGAGCTTCCATAACTGCTGGAGAGCAATAGTTTTCTGATG 225071 Query 7215 CAATCAA 7221 |||| || Sbjct 225070 CAATTAA 225064 Score = 89.7 bits (98), Expect = 6e-13 Identities = 167/243 (69%), Gaps = 8/243 (3%) Strand=Plus/Minus Query 6470 GCTTCACCGAAGCAAATAGCCTTTGCCGCGATAACATGCATTAACGGACCACCCTGAATA 6529 ||||| ||| ||||| || || || || || ||||||| || |||||||| || || Sbjct 225806 GCTTCTTTGAAACAAATTGCTTTAGCAGCAATTGCATGCATCAAAGGACCACCTTGGTTA 225747 Query 6530 CCCGGGAAGATAGCAGAATTTACTTTCTTGGCGATATCAGCAT---CGTTAGTAAGAATG 6586 || ||||| | |||||| | | |||||| |||| || ||| | || | ||| || Sbjct 225746 CCAGGGAATACAGCAGATTGAAGTTTCTTCTCGATTTCTTCATTTGCTTTTGCAAGGATT 225687 Query 6587 AGACCACCACGAGGGCCGCGCAAAGTTTTATGAGTTGTAGAAGTAACAACGTCAGCACCC 6646 | |||| ||| || ||||| | |||||||||||||||| || || |||||| Sbjct 225686 AAACCAGAACGTGGACCGCGAAGCGTTTTATGAGTTGTAGTCGTTGTTACATCAGCA--- 225630 Query 6647 CATTTG-AGTGGATTAGCATGAAGTTTTGATGCGACGAATCCAGCAAAGTGGGCCATATC 6705 ||||| | ||| || | | || | || || || || |||| ||| |||||||| Sbjct 225629 -ATTTGAACTGGGTTCGGGTAAACACCAGCAGCAACTAAACCTGCAACGTGAGCCATATC 225571 Query 6706 GAC 6708 || Sbjct 225570 AAC 225568 >seq82400 Length=4037 Score = 122 bits (134), Expect = 1e-22 Identities = 206/296 (70%), Gaps = 2/296 (1%) Strand=Plus/Plus Query 6926 CCATGTGTTAAATGACCACCGCAATCCAAAGACATCGCCAATACTGAATCGCCTGGACTC 6985 || || ||||| |||||||| | | || ||| | | ||||| |||| || Sbjct 3590 CCGTGAGTTAAGTGACCACCATGAGCTAAGCTCATACCTAGTACTGTATCGTGCGGCTGA 3649 Query 6986 AGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTGCG 7045 || | || ||| |||||||| |||||| ||||| || | ||| ||||||||||| ||| Sbjct 3650 AGAAGTGCTTGGAAAACAGCTGCGTTTGCTTGTGAGCCCGCATGCGGTTGAACGTTAGCG 3709 Query 7046 AAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATCTCATCGGCT 7105 ||| | || | ||| || ||||| |||||||| | | ||| | |||| | Sbjct 3710 TAATCTGTGCCGAATAATTCGTTTGCACGGTCAATTGCTAATTGCTCAACAACATCAACA 3769 Query 7106 TTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGTAAAA 7165 | |||||||||| || || ||||||||||| || || ||||| || |||||||||| Sbjct 3770 TGCTCACAACCGCCATAGTAACGTTTGCCTGGGTAACCTTCAGCGTATTTGTTGGTAAGC 3829 Query 7166 ATAGAACCTTGCGCTTTCATAACATCATCGGACAC-ATAGTTTTCGGATGCAATCA 7220 |||||| ||||||| | || | | || || ||||||||| || || |||| Sbjct 3830 TGAGAACCCTGCGCTTCAAGTAC-GCGTGGGCTACAATAGTTTTCAGACGCGATCA 3884 >seq6649 Length=83632 Score = 104 bits (114), Expect = 3e-17 Identities = 200/295 (68%), Gaps = 0/295 (0%) Strand=Plus/Plus Query 6926 CCATGTGTTAAATGACCACCGCAATCCAAAGACATCGCCAATACTGAATCGCCTGGACTC 6985 ||||| |||| ||| || || ||| || || | | | || | |||||||||| | Sbjct 48215 CCATGAGTTAGATGGCCGCCACAACTCAGCGATAATCCAAGTATCGTATCGCCTGGAGTA 48274 Query 6986 AGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTGCG 7045 |||| | | | || ||||| |||||||| ||||| || || |||||||| ||||| Sbjct 48275 AGCAGTGAAGCAAATACTGCTTGATTTGCCTGAGAACCAGAGTGAGGTTGAACATTTGCA 48334 Query 7046 AAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATCTCATCGGCT 7105 || || || ||||| | | | || || || || | || | | || | Sbjct 48335 AATTTAACACCGAACAGCTTACAAAGTCTTTCTATAGCTAGACTTTCAACTTTGTCCACA 48394 Query 7106 TTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGTAAAA 7165 | ||||||| | |||||||| |||||||||||| || || |||||||| || || | | Sbjct 48395 TGCTCACAACCACAGTAATACCTTTTGCCTGGATAGCCTTCTGCATACTTATTAGTCAGA 48454 Query 7166 ATAGAACCTTGCGCTTTCATAACATCATCGGACACATAGTTTTCGGATGCAATCA 7220 | ||| || ||||||| ||| || | | || ||||||| |||||||||| Sbjct 48455 AAAGAGCCCTGCGCTTCCATCACTGCTTTACTTGCAAAGTTTTCTGATGCAATCA 48509 >seq7 Length=747525 Score = 96.9 bits (106), Expect = 4e-15 Identities = 148/210 (70%), Gaps = 6/210 (3%) Strand=Plus/Plus Query 6973 ATCGCCTGGACTCAGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGG 7032 |||||| | | | | ||| || || | || ||| ||| ||||||||||| || || || Sbjct 396404 ATCGCCGGCATTTAACAAGGCCAGGAATACCGCTGAGTTCGCCTGTGAACCTGAGTGCGG 396463 Query 7033 TTGAACGTTTGCGAAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTC 7092 ||| ||||| ||| | | | || ||| | |||||| || || |||| || | | || Sbjct 396464 TTGTACGTTGGCGTAGTCGGCACCAAATAATTCTTTCGCGCGGGCAATGGCTAAATCTTC 396523 Query 7093 ---GATCTCATCGGCTTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGC 7149 ||| ||| | | | |||| ||||||||||| |||||| ||||| || ||||| Sbjct 396524 CGCGAT---ATCCACATATTCACAGCCGCCGTAATAACGTTTGTGCGGATAACCTTCAGC 396580 Query 7150 ATACTTGTTGGTAAAAATAGAACCTTGCGC 7179 ||| || ||||| || ||||||||||| Sbjct 396581 ATATTTATTGGTTAATTGTGAACCTTGCGC 396610 >seq379 Length=288837 Score = 91.5 bits (100), Expect = 2e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 6467 AGAGCTTCACCGAAGCAAATAGCCTTTGCCGCGATAACATGCATTAACGGACCACCCTGA 6526 || || ||||||||| | ||||| || ||||| |||||||| | ||| || ||||| Sbjct 67479 AGCGCCTCACCGAAGGCCACCGCCTTGGCAGCGATGACATGCATCAGCGGGCCGCCCTGG 67420 Query 6527 ATACCCGGGAAGATAGCAGAATTTACTTTCTTGGCGATATCAGCATCGTTAGTAAGAATG 6586 || || |||||||| || || || || ||||||||||| || | | || || || || Sbjct 67419 ATGCCGGGGAAGATGGCCGAGTTGACCTTCTTGGCGATGTCCTCGTTATTCGTCAGGATC 67360 Query 6587 AGACCACCACGAGGGCCGCGCAAAGTTTTATGAGTTGT 6624 | || ||||| ||||| |||| || || || || || Sbjct 67359 ATGCCGCCACGCGGGCCACGCAGGGTCTTGTGCGTGGT 67322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552106922006880