Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq2234 131 1e-25
>seq2234
Length=154088
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || ||||| ||||||| ||| | || ||| | ||||| ||| | |
Sbjct 11422 ATGCAAATTTTCGTGAAAACCCTAACTGGCAAAACCATCACCTTGGAAGTAGAGCCTAGT 11481
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| || || | |||||| || ||| ||||||||||| || || || ||||||
Sbjct 11482 GACACAATAGAAAACGTCAAAGCCAAAATTCAAGACAAAGAAGGTATCCCCCCAGATCAA 11541
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||||| || |||| | || ||||| | ||||||| | | | ||||| |||
Sbjct 11542 CAGAGGCTAATTTTTGCTGGTAAGCAGTTGGAAGATGGTCGTACTCTTTCTGATTACAAC 11601
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| ||||||||||||||| | |||||||| | || |||||||||||
Sbjct 11602 ATCCAAAAAGAATCTACATTACATTTAGTTCTGAGGTTGAGAGGAGG 11648
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | |||||||| || |||| || ||| | ||||| | |||||||| | |
Sbjct 11878 ATGCAAATTTTTGTAAAGACTCTAACAGGTAAAACAATTACATTAGAAGTCGAACCAAGT 11937
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| ||||| || | || ||| ||| || ||||||||||| || || || |||||
Sbjct 11938 GATACCATTGAAAATGTTAAAGCAAAAATCCAGGACAAAGAAGGAATTCCCCCAGATCAG 11997
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | | |||| | || |||||||| ||||||| | | | | |||||||||
Sbjct 11998 CAGCGTTTAATTTTTGCTGGTAAGCAACTAGAAGATGGCCGTACTCTGTCGGATTATAAC 12057
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||||||||||||||| | ||| | || |||||| | ||||||||
Sbjct 12058 ATTCAAAAAGAATCTACTCTGCATCTGGTTTTAAGACTCAGAGGAGG 12104
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| ||||| | |||||||| | || ||| | ||||| || | | |
Sbjct 12106 ATGCAAATTTTTGTTAAAACCCTCACTGGAAAGACCATCACCTTAGAAGTAGAACCAAGC 12165
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| || || || | |||||| ||| ||| || ||||||||||| || || |||||
Sbjct 12166 GATACAATTGAAAATGTCAAAACAAAAATTCAAGATAAAGAAGGCATTCCACCAGATCAG 12225
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| || ||||||| | || || || || ||||||| | | | | ||||| |||
Sbjct 12226 CAAAGGCTGATTTTTGCTGGTAAACAGCTTGAAGATGGGCGTACCCTGTCGGATTACAAC 12285
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| |||||||| |||||| | ||| |||| | ||||| ||||||||
Sbjct 12286 ATCCAAAAAGAGTCTACACTCCATCTAGTTCTCAGATTAAGAGGAGG 12332
Score = 104 bits (114), Expect = 2e-17
Identities = 162/232 (70%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 23986 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGG 24045
|||||||||| | ||||| ||||| | || || || | || || | || || |||
Sbjct 10505 ACAAAATGCAGATTTTTGTGAAAACTCTCACCGGCAAGACCATCACTCTAGAGGTTGAGC 10564
Query 24046 CCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCG 24105
| | || ||||| || | || || |||||| ||||||||||| || ||||| |
Sbjct 10565 CTAGTGATACCATTGAAAATGTAAAGGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAG 10624
Query 24106 ATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATT 24165
||||||| || |||| | | || || ||| | ||||||| |||| | || || |
Sbjct 10625 ATCAACAACGATTGATCTTTGCTGGAAAACAATTGGAAGATGGAAGAACCCTCTCGGACT 10684
Query 24166 ATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
| ||||||||||| ||||| ||| ||||| |||| | || | ||||| ||
Sbjct 10685 ACAACATTCAAAAGGAATCCACACTTCATCTAGTTCTCAGGCTCAGAGGTGG 10736
Score = 98.7 bits (108), Expect = 9e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| ||||| || || || || | || ||| | ||| || | | |
Sbjct 11194 ATGCAAATATTTGTCAAAACTTTGACAGGGAAGACCATAACCTTAGAAAGTGAACCTAGC 11253
Query 24051 GACACCATCGAGCAAGTCAA-ACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
||||| || || | ||||| |||||| || || |||||||| || || || || ||
Sbjct 11254 GACACAATAGAAAATGTCAAGACAAAA-ATCCAAGATAAAGAAGGTATTCCCCCAGACCA 11312
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
|||| | |||||| | || |||||||| ||||||| | | | | || || ||
Sbjct 11313 ACAGCGTTTGATTTTTGCTGGTAAGCAACTAGAAGATGGCCGTACTCTATCGGACTACAA 11372
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||| ||||||||||| | ||| |||| || || | ||||||||
Sbjct 11373 CATTCAGAAAGAATCTACTCTACATCTAGTCTTGAGGCTTAGAGGAGG 11420
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| ||||| | ||||| ||| | || ||| | ||||| || | |
Sbjct 12646 ATGCAAATTTTTGTTAAAACCCTGACTGGCAAAACCATCACCTTAGAAGTTGAACCTAGT 12705
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| || || ||| | || ||| || || || |||||||| || || || |||||
Sbjct 12706 GATACAATTGAGAATGTGAAAGCCAAAATCCAGGATAAAGAAGGTATTCCCCCAGATCAG 12765
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAAC--GTCAGCGATTATA 24168
||||| | || | | || || ||||| ||||||| ||||| ||||| ||||||
Sbjct 12766 CAGAGGTTAATCTTTGCTGGTAAACAACTTGAAGATGGCAGAACTTTGTCAG--ATTATA 12823
Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
| || || || |||||||| | || || || | || |||||||||||
Sbjct 12824 ATATCCAGAAGGAATCTACTCTACACTTGGTTCTCAGGTTGAGAGGAGG 12872
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | ||||| || || | ||||||||| | || || | ||||| ||| | |
Sbjct 10738 ATGCAGATCTTTGTGAAGACTCTGACTGGAAAAACCATCACTCTTGAAGTGGAGCCTAGT 10797
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| ||||| | || || |||||| || ||||| || || || || |||||
Sbjct 10798 GACACAATCGAAAATGTGAAGGCCAAGATTCAAGATAAAGAGGGTATCCCACCAGATCAG 10857
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||||| ||||| | | || ||||| || ||||||| | | | | ||||| ||
Sbjct 10858 CAGAGGCTGATCTTTGCTGGAAAGCAGCTTGAAGATGGCCGTACTCTTTCAGATTACAAT 10917
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218
|| ||||||||||| || |||| | || | || |||||||||||
Sbjct 10918 ATCCAAAAAGAATCCACTCTTCACCTGGTTCTCCGACTGAGAGGAGGA 10965
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 24018 GGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAG 24077
|| ||| | ||||| | ||||| || | | || ||||| ||| | || ||| ||
Sbjct 12445 GGTAAAACCATTACTCTTGAAGTTGAACCAAGTGATACCATTGAGAATGTGAAAGCTAAA 12504
Query 24078 ATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAA 24137
||| || |||||||| || ||||| ||||| ||||| | || | || || || |||
Sbjct 12505 ATTCAAGATAAAGAAGGTATTCCTCCAGATCAGCAGAGGTTAATCTTCGCAGGTAAACAA 12564
Query 24138 CTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTA 24197
|| ||||||| | ||| | | || ||||||||||| |||||||| || | ||| ||
Sbjct 12565 CTTGAAGATGGCCGAACCCTATCGGACTATAACATTCAGAAAGAATCAACTCTGCATCTA 12624
Query 24198 GTGTTAAGATTGAGAGGAGG 24217
|| || || | |||||||
Sbjct 12625 GTCTTGAGGCTCCGAGGAGG 12644
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
||||||| | || ||||| || | || || || | || || | ||||| || | |
Sbjct 10965 AATGCAAATATTCGTAAAGACTCTGACAGGGAAGACCATAACGTTAGAAGTTGAACCTAG 11024
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
|||||| || || | |||||| ||| || || ||||||||||| ||||| || ||
Sbjct 11025 CGACACAATAGAAAATGTCAAAACAAAAATCCAGGATAAAGAAGGCATCCCTCCAGACCA 11084
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
|||||| |||| | || ||| || || || ||||||| | | | ||||| ||
Sbjct 11085 GCAGAGATTGATCTTCGCCGGAAAACAGCTTGAAGATGGTCGTACTCTGTCTGATTACAA 11144
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| || |||||||| || |||| || || | || | ||||||||
Sbjct 11145 TATCCAGAAAGAATCCACTCTTCACTTGGTTCTGCGACTTAGAGGAGG 11192
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428991591296580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |