Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_007710.1 Length=46643 Score E Sequences producing significant alignments: (Bits) Value seq103 165 2e-36 seq16123 123 7e-24 >seq103 Length=407632 Score = 165 bits (182), Expect = 2e-36 Identities = 279/393 (71%), Gaps = 12/393 (3%) Strand=Plus/Minus Query 35482 GCCGTTGCCGGCCTATGCCACCGAAGCCAGTGCAGGCATGGACCTGCGTGCCGCACTGGA 35541 |||| |||||||||| |||||||||| | || ||| | |||||||| ||| ||||| Sbjct 366591 GCCGCTGCCGGCCTACGCCACCGAAGGCTCCGCCGGCCTCGACCTGCGCGCCCTGCTGGA 366532 Query 35542 GGCGCCGATGACGTTGCAGCCGGGCGATGCGGCGCTGATTCCCAGCGGCATCGCGATCCA 35601 |||||| ||||| || | |||||||| | | |||| | | || |||| | || ||| | Sbjct 366531 CGCGCCGCTGACGCTGAACCCGGGCGACACCGTGCTGGTGCGCACCGGCCTGGCCATCTA 366472 Query 35602 TCTGGCCGACCCGCAGCTGTGCGCGG--TGATCCTGCCGCGCTCGGGGCTTGGCCATCGT 35659 | |||||||| | ||| || ||| ||||||| ||||||||||| || ||||| Sbjct 366471 CATCGCCGACCC-CGGCTACGC-CGGCCTGATCCTTCCGCGCTCGGGCCTCGGCCACAAG 366414 Query 35660 CACGGCATCGTACTCGGCAAC--GGTACCGGCCTCATCGATGCGGATTACCAGGGGTCGT 35717 ||||||||||| ||||||||| ||| ||| || ||||| || || |||||||| | Sbjct 366413 CACGGCATCGTGCTCGGCAACCTGGT--CGGGCTGATCGACGCCGACTACCAGGGCGAGC 366356 Query 35718 TGTTGATCAGCACCTGGAATCGCGGC-CGCGAGGCCTTCACCATCGAGCCGGGCGACCGG 35776 | || | ||||| |||||| ||| || | ||| | ||||||||||| || Sbjct 366355 TCATGGTGTCGGTGTGGAACCGCGGCGCGC-AGCCGTTCGTGCTGGAGCCGGGCGAGCGC 366297 Query 35777 ATTGCGCAGCTGGTGATCCTGCCGGTCGTGCGCGTAGGCTTGCGAG-TGGTGGACACTTT 35835 | |||||| ||| | ||||||| |||| | || || |||| | ||| | || Sbjct 366296 CTGGCGCAGTACGTGCTGGTGCCGGTGGTGCAGGCAGAATT-CGAGATCGTGTCCGAGTT 366238 Query 35836 CGTCGACAGCGCGCGCGGCGCGGGTGGATTCGG 35868 | | || ||||||||||| || || ||||| Sbjct 366237 CCAGGCCACGGCGCGCGGCGCCGGCGGCTTCGG 366205 >seq16123 Length=37093 Score = 123 bits (136), Expect = 7e-24 Identities = 249/363 (69%), Gaps = 10/363 (3%) Strand=Plus/Minus Query 35448 TGAAGTTGCTCGACCCGCGTTTCGGCGATCTGTGGCCGTTGCCGGCCTATGCCACCGAAG 35507 |||| | ||||||||||| ||||| | || || || ||||||||||| | Sbjct 15145 TGAAAATTCTCGACCCGCGGATCGGCCGCGACTTCCCATTACCAGCCTATGCCACACCCG 15086 Query 35508 CCAGTGCAGGCATGGACCTGCGTGCCGCACTGGAGG---CGCCGATGACGTTGCAGCCGG 35564 | || ||| |||| | ||||| |||||| | | ||| || | ||| |||| Sbjct 15085 GCTCAGCGGGCCTGGATTTACGTGCTTGTCTGGAGCAAACCCTGAT-AC-TGGCA-CCGG 15029 Query 35565 GCGATGCGGCGCTGATTCCCAGCGGCATCGCGATCCATCTGGCCGACCCGCAGCTGTGCG 35624 || | | | |||||| || | ||| || || || ||| | | ||| | | ||||||| Sbjct 15028 GCCAAACCGTGCTGATCCCAACCGGTATTGCCATTCATATTGGCGATGCCAACCTGTGCG 14969 Query 35625 CGGTGATCCTGCCGCGCTCGGGGCTTGGCCATCGTCACGGCATCGTACTCGGCAAC--GG 35682 | ||||||||||||||||| || || ||| || ||||||||||| ||||| || Sbjct 14968 CAACCATCCTGCCGCGCTCGGGCCTGGGGCATAAACATGGCATCGTACTGGGCAATTTGG 14909 Query 35683 TACCGGCCTCATCGATGCGGATTACCAGGGGTCGTTGTTGATCAGCACCTGGAATCGCGG 35742 | || || || ||| |||| || |||||| | ||| || | | ||||| ||||| Sbjct 14908 TG--GGGCTGATTGATTCGGACTATCAGGGGCCCTTGATGGTGTCGATGTGGAACCGCGG 14851 Query 35743 CCGCGAGGCCTTCACCATCGAGCCGGGCGACCGGATTGCGCAGCTGGTGATCCTGCCGGT 35802 | |||| ||| | ||| || ||||||||||| || || |||||||| | ||||||| Sbjct 14850 CAGCGACAGCTTTAGCATTGAACCGGGCGACCGCATCGCCCAGCTGGTATTTATGCCGGT 14791 Query 35803 CGT 35805 || Sbjct 14790 GGT 14788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148816803846360