Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq2234 114 1e-20 >seq2234 Length=154088 Score = 114 bits (126), Expect = 1e-20 Identities = 165/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| ||||| || || | ||| || ||||| |||||||| ||||||||||| | Sbjct 10736 CCACCTCTGAGCCTGAGAACTAGATGAAGTGTGGATTCCTTTTGAATGTTGTAGTCCGAG 10677 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | | || ||||||||||| || ||| | || | || ||||| || ||| Sbjct 10676 AGGGTTCTTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCGTTGTTGATCTGGAGGA 10617 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || |||||||| ||| | ||| || | | | || || | ||||| Sbjct 10616 ATTCCTTCTTTGTCCTGAATCTTGGCCTTTACATTTTCAATGGTATCACTAGGCTCAACC 10557 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGTA 16941 || | |||||||| || ||||| || ||||| |||||||||||||||||||| Sbjct 10556 TCTAGAGTGATGGTCTTGCCGGTGAGAGTTTTCACAAAAATCTGCATTTTGTA 10504 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| | |||||| || | ||| | || || || ||||| |||||||| || | Sbjct 11648 CCTCCTCTCAACCTCAGAACTAAATGTAATGTAGATTCTTTTTGGATGTTGTAATCAGAA 11589 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | || ||||| || || || ||| |||| |||| |||||| || || Sbjct 11588 AGAGTACGACCATCTTCCAACTGCTTACCAGCAAAAATTAGCCTCTGTTGATCTGGGGGG 11529 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || |||||||| ||||| ||| || || | | | ||||| | ||||| Sbjct 11528 ATACCTTCTTTGTCTTGAATTTTGGCT--TTGACGTTTTCTATTGTGTCACTAGGCTCTA 11471 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| |||||||||||| || || || ||||| || ||||| ||||| Sbjct 11470 CTTCCAAGGTGATGGTTTTGCCAGTTAGGGTTTTCACGAAAATTTGCAT 11422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404198173065640