Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq8223 131 1e-25 seq2234 120 2e-22 seq1083 102 5e-17 seq158751 98.7 7e-16 seq5756 89.7 3e-13 seq1055 89.7 3e-13 seq9669 87.8 1e-12 seq32926 82.4 5e-11 >seq8223 Length=71331 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||| ||||||||||||||| |||||||||||||||||||||||| || |||||||| Sbjct 19523 AAGTCCGTTCCCTTGGCTGCGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 19464 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 19463 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 19429 >seq2234 Length=154088 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| ||||| | |||| ||||| ||||||||| || || || ||||||||||||| Sbjct 11194 TACCTCCTCTAAGTCGCAGAACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAG 11135 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| | ||| | || || | ||||||||||| || || | | || || || | | Sbjct 11134 ACAGAGTACGACCATCTTCAAGCTGTTTTCCGGCGAAGATCAATCTCTGCTGGTCTGGAG 11075 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||||||| ||| |||||| || ||||| | | || || | | ||||| Sbjct 11074 GGATGCCTTCTTTATCCTGGATTTTTGTTTTGACATTTTCTATTGTGTCGCTAGGTTCAA 11015 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||||| || || || || || |||| || || |||||||| ||||| Sbjct 11014 CTTCTAACGTTATGGTCTTCCCTGTCAGAGTCTTTACGAATATTTGCAT 10966 Score = 118 bits (130), Expect = 7e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || |||||||| | | ||||| || ||||| ||||| || ||||| ||||| ||| Sbjct 12872 CCTCCTCTCAACCTGAGAACCAAGTGTAGAGTAGATTCCTTCTGGATATTATAATCTGAC 12813 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 ||| | | || || | |||||| || ||||| |||| | || ||||| | ||| Sbjct 12812 AAAGTTCTGCCATCTTCAAGTTGTTTACCAGCAAAGATTAACCTCTGCTGATCTGGGGGA 12753 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||||| ||| ||||| |||||||||| | ||||| | | ||||||| Sbjct 12752 ATACCTTCTTTATCCTGGATTTTGGCTTTCACATTCTCAATTGTATCACTAGGTTCAACT 12693 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 ||||| || || ||||| || |||| |||||| || || || |||||| Sbjct 12692 TCTAAGGTGATGGTTTTGCCAGTCAGGGTTTTAACAAAAATTTGCATG 12645 Score = 114 bits (126), Expect = 9e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 38106 AACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCG 38165 || |||| ||| ||||| || |||||||| || ||||| |||| | ||| | || Sbjct 12089 AAAACCAGATGCAGAGTAGATTCTTTTTGAATGTTATAATCCGACAGAGTACGGCCATCT 12030 Query 38166 TCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCC 38225 |||| ||| || || ||||| |||| || || ||||| | ||| | |||||||||||| Sbjct 12029 TCTAGTTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGGGGAATTCCTTCTTTGTCC 11970 Query 38226 ATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTT 38285 |||||| || ||||| | | ||||| | ||| |||||||||||||| ||| Sbjct 11969 TGGATTTTTGCTTTAACATTTTCAATGGTATCACTTGGTTCGACTTCTAATGTAATTGTT 11910 Query 38286 TTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 ||||| || | || || || || || |||||| Sbjct 11909 TTACCTGTTAGAGTCTTTACAAAAATTTGCATG 11877 Score = 109 bits (120), Expect = 4e-19 Identities = 165/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| | | | || | |||||| ||| ||||||||||| ||||| || | Sbjct 10738 TACCACCTCTGAGCCTGAGAACTAGATGAAGTGTGGATTCCTTTTGAATGTTGTAGTCCG 10679 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | | | || || ||||||||||| ||||| || | ||||||||||| | | Sbjct 10678 AGAGGGTTCTTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCGTTGTTGATCTGGAG 10619 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | |||||||||||| ||| || ||| ||||| | | ||||| | | |||| Sbjct 10618 GAATTCCTTCTTTGTCCTGAATCTTGGCCTTTACATTTTCAATGGTATCACTAGGCTCAA 10559 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTTTA 38323 | |||| || || || || || || | |||||||| || |||||||| || || Sbjct 10558 CCTCTAGAGTGATGGTCTTGCCGGTGAGAGTTTTCACAAAAATCTGCATTTTGTA 10504 Score = 109 bits (120), Expect = 4e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| |||||||| | || || ||||| | || || ||||| || |||||||||| Sbjct 11650 TACCTCCTCTCAACCTCAGAACTAAATGTAATGTAGATTCTTTTTGGATGTTGTAATCAG 11591 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | ||| | || || || || || || ||||| ||||| | |||||||| | || Sbjct 11590 AAAGAGTACGACCATCTTCCAACTGCTTACCAGCAAAAATTAGCCTCTGTTGATCTGGGG 11531 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||||||||| |||||| || || || | | || || | | || | Sbjct 11530 GGATACCTTCTTTGTCTTGAATTTTGGCTTTGACGTTTTCTATTGTGTCACTAGGCTCTA 11471 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 |||| || || || ||||| || || | |||||||||||| || |||||| Sbjct 11470 CTTCCAAGGTGATGGTTTTGCCAGTTAGGGTTTTCACGAAAATTTGCATG 11421 Score = 109 bits (120), Expect = 4e-19 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || ||||| | | ||| ||||| ||||| || |||||||| || ||||| || ||| Sbjct 11876 CCTCCTCTTAGTCTCAAGACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAGTCCGAC 11817 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | |||| | || |||| || || || ||||| |||| ||||||||||| | ||| Sbjct 11816 AGAGTACGTCCATCTTCTAGCTGCTTGCCCGCAAAGATTAATCGTTGTTGATCAGGAGGG 11757 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT---TCA 38267 | ||||| || || |||||| || ||||| | | |||| ||||| ||| Sbjct 11756 ATACCTTCCTTATCTTGAATTTTAGCTTTGACATTTTCAATTGTAT---CACTTGGCTCA 11700 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||||| |||||| || || || || | ||||| ||||| || ||||| Sbjct 11699 ACTTCTAGTGTAATTGTCTTCCCAGTAAGAGTTTTGACGAAGATTTGCAT 11650 Score = 95.1 bits (104), Expect = 8e-15 Identities = 161/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| || ||||||| || | |||| ||||||||| || ||||| |||||||||| Sbjct 10968 CATT-CCTCCTCTCAGTCGGAGAACCAGGTGAAGAGTGGATTCTTTTTGGATATTGTAAT 10910 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | || | | ||| | || || | || ||||| ||||| || || | || ||||| | Sbjct 10909 CTGAAAGAGTACGGCCATCTTCAAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCTG 10850 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 |||| || ||||| || ||| || ||||||||| | || || || | | | Sbjct 10849 GTGGGATACCCTCTTTATCTTGAATCTTGGCCTTCACATTTTCGATTGTGTCACTAGGCT 10790 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | ||||| | || || ||||| || |||| || ||||| || |||||||| Sbjct 10789 CCACTTCAAGAGTGATGGTTTTTCCAGTCAGAGTCTTCACAAAGATCTGCAT 10738 Score = 84.2 bits (92), Expect = 1e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 ||| ||||| || ||||| |||||| |||||||| || ||||||| | | | || Sbjct 13450 CAAAACCAAGTGTAGAGTAGACTCCTTCTGAATATTATAGTCAGACAGGGTTCTTCCATC 13391 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || || ||||| || ||||| || || ||||||||||| | || | ||||| ||||| Sbjct 13390 TTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGATCTGGTGGTATTCCTTCCTTGTC 13331 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 || ||| || || || | | |||||| | || ||||||| |||||| || Sbjct 13330 TTGGATCTTTGCTTTAACGTTTTCAATAGTATCACTGGGCTCGACTTCTAGTGTAATTGT 13271 Query 38285 TTTACC 38290 ||| || Sbjct 13270 TTTTCC 13265 >seq1083 Length=206959 Score = 102 bits (112), Expect = 5e-17 Identities = 77/91 (85%), Gaps = 5/91 (5%) Strand=Plus/Plus Query 25906 CCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAAT 25960 |||| |||||||||| |||||| ||||||||| |||||| || |||||||||||| Sbjct 4096 CCGTACCCTTGGCTGCGGTTTCACTAGATAGTTGATAGGAACAGTGGGAATCTCGTTAAT 4155 Query 25961 CCTTTCATGCGCGTCACTAATTAGATGACGA 25991 || ||||||||||||| ||||||||| |||| Sbjct 4156 CCATTCATGCGCGTCATTAATTAGATAACGA 4186 >seq158751 Length=1110 Score = 98.7 bits (108), Expect = 7e-16 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||| | Sbjct 900 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATTGGTCTCCC 841 Query 20007 GGTAATATTTAGCCTTA 20023 ||||||||| ||| Sbjct 840 ATCCATATTTAGCTTTA 824 >seq5756 Length=91938 Score = 89.7 bits (98), Expect = 3e-13 Identities = 72/90 (80%), Gaps = 13/90 (14%) Strand=Plus/Plus Query 25915 TGGCTGTGGTTTCGCTAGATAGTAGATAGGG-------------GGTAATCTCGTTAATC 25961 |||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct 41642 TGGCTGTGGTTTCGCTAGATGGTAGATAGGGACTGTGTGTGTGTGGGAATCTCGTTAATC 41701 Query 25962 CTTTCATGCGCGTCACTAATTAGATGACGA 25991 | ||||||||| ||||||||| |||||||| Sbjct 41702 CATTCATGCGCATCACTAATTGGATGACGA 41731 >seq1055 Length=208470 Score = 89.7 bits (98), Expect = 3e-13 Identities = 60/67 (90%), Gaps = 5/67 (7%) Strand=Plus/Plus Query 25930 TAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAG 25984 |||||||||||||||| || |||||||||||||| ||||||||||||||||||||| Sbjct 63570 TAGATAGTAGATAGGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 63629 Query 25985 ATGACGA 25991 ||||||| Sbjct 63630 ATGACGA 63636 >seq9669 Length=62194 Score = 87.8 bits (96), Expect = 1e-12 Identities = 92/120 (77%), Gaps = 1/120 (1%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 ||||||||||| ||||| |||||||| | ||| |||||||||||| ||||| ||||| Sbjct 58792 ACCACCTCTCAGGCGCAAGACCAAATGTAAAGTAGACTCCTTTTGAATGTTGTAGTCAGA 58733 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATC-GGAGG 38208 | | ||| | || || || || ||||| ||||| |||| | ||| ||||| ||||| Sbjct 58732 AAGAGTTCGTCCTTCTTCCAACTGCTTTCCAGCAAAAATTAATCTTTGCTGATCAGGAGG 58673 >seq32926 Length=14205 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/214 (68%), Gaps = 7/214 (3%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 ||| ||||| || | ||| |||||| |||||||| || ||||||| | | | || Sbjct 13908 CAAAACCAAGTGTACAGTAGACTCCTTCTGAATATTATAGTCAGACAGGGTTCTTCCATC 13967 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || || || ||||| || || ||||||||||| | || | ||||| ||||| Sbjct 13968 TTCCAA-------CCAGCAAAAATGAGACGTTGTTGATCTGGTGGTATTCCTTCCTTGTC 14020 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 || ||| || || || | | || ||| | || ||||||| |||||| || Sbjct 14021 TTGGATCTTTGCTTTAACGTTTTCAATAGCATCACTGGGCTCGACTTCTAGTGTAATTGT 14080 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 ||| || || | ||||| ||||||||||||||| Sbjct 14081 TTTTCCTGTTAGAGTTTTGACGAATATCTGCATG 14114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334211446188116