Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq2234 149 5e-31 seq32926 96.9 3e-15 seq8748 95.1 1e-14 seq87354 82.4 6e-11 >seq2234 Length=154088 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||||||||| | || || || || |||| | ||||| ||| | | | Sbjct 12106 ATGCAAATTTTTGTTAAAACCCTCACTGGAAAGACCATCACCTTAGAAGTAGAACCAAGC 12165 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || ||||| |||||||||||| || || || |||||||| ||||| Sbjct 12166 GATACAATTGAAAATGTCAAAACAAAAATTCAAGATAAAGAAGGCATTCCACCAGATCAG 12225 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | || || ||||| || |||||| | || ||| || ||| | || ||||||||| Sbjct 12226 CAAAGGCTGATTTTTGCTGGTAAACAGCTTGAAGATGGGCGTACCCTGTCGGATTACAAC 12285 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || |||||||| || || | ||| ||||| | |||| | ||||| Sbjct 12286 ATCCAAAAAGAGTCTACACTCCATCTAGTTCTCAGATTAAGAGGAGG 12332 Score = 141 bits (156), Expect = 8e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || ||||| |||| || ||||| |||| | ||||| || | | Sbjct 11422 ATGCAAATTTTCGTGAAAACCCTAACTGGCAAAACCATCACCTTGGAAGTAGAGCCTAGT 11481 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | ||||| |||||||||||||| || ||||| || || |||||| Sbjct 11482 GACACAATAGAAAACGTCAAAGCCAAAATTCAAGACAAAGAAGGTATCCCCCCAGATCAA 11541 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| || || ||||| || ||| || || | || ||||||||| Sbjct 11542 CAGAGGCTAATTTTTGCTGGTAAGCAGTTGGAAGATGGTCGTACTCTTTCTGATTACAAC 11601 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||||||||| || ||||||||||| || | ||| | |||||| Sbjct 11602 ATCCAAAAAGAATCTACATTACATTTAGTTCTGAGGTTGAGAGGAGGT 11649 Score = 134 bits (148), Expect = 1e-26 Identities = 166/226 (73%), Gaps = 1/226 (0%) Strand=Plus/Plus Query 22203 TTATACATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCT 22262 || || |||| ||| ||||| |||||||| |||||| | ||||| || || ||||||| Sbjct 10495 TTGTAGATTTACAAA-ATGCAGATTTTTGTGAAAACTCTCACCGGCAAGACCATCACTCT 10553 Query 22263 TGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGG 22322 || || || | | |||||| | || || | || || ||||| ||||| || || Sbjct 10554 AGAGGTTGAGCCTAGTGATACCATTGAAAATGTAAAGGCCAAGATTCAGGACAAAGAAGG 10613 Query 22323 TATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCAC 22382 ||||| || ||||||||||| | || ||||| || ||||| || || ||| | || Sbjct 10614 AATTCCTCCAGATCAACAACGATTGATCTTTGCTGGAAAACAATTGGAAGATGGAAGAAC 10673 Query 22383 CGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTT 22428 | |||| || |||||||||||||| |||||||| | ||| ||||| Sbjct 10674 CCTCTCGGACTACAACATTCAAAAGGAATCCACACTTCATCTAGTT 10719 Score = 134 bits (148), Expect = 1e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || ||| |||| |||||||| | || | ||||| ||| | | Sbjct 11878 ATGCAAATTTTTGTAAAGACTCTAACAGGTAAAACAATTACATTAGAAGTCGAACCAAGT 11937 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || | ||| |||||| || ||||| || || ||||| || ||||| Sbjct 11938 GATACCATTGAAAATGTTAAAGCAAAAATCCAGGACAAAGAAGGAATTCCCCCAGATCAG 11997 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || ||||| || || || |||| ||| ||| || | || ||||| ||| Sbjct 11998 CAGCGTTTAATTTTTGCTGGTAAGCAACTAGAAGATGGCCGTACTCTGTCGGATTATAAC 12057 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTT 22430 |||||||||||||| || | ||| | ||||| Sbjct 12058 ATTCAAAAAGAATCTACTCTGCATCTGGTTTT 12089 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || |||||| | || || || || | || || ||||| || | | Sbjct 11650 ATGCAAATCTTCGTCAAAACTCTTACTGGGAAGACAATTACACTAGAAGTTGAGCCAAGT 11709 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || ||||| ||||||||||| ||||| ||||| || || |||||| Sbjct 11710 GATACAATTGAAAATGTCAAAGCTAAAATTCAAGATAAGGAAGGTATCCCTCCTGATCAA 11769 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || ||||| ||||| ||| |||| ||| || || | || || |||||| Sbjct 11770 CAACGATTAATCTTTGCGGGCAAGCAGCTAGAAGATGGACGTACTCTGTCGGACTACAAC 11829 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||| ||||| ||| | || || || ||| || | | ||||| Sbjct 11830 ATCCAAAAGGAATCAACCCTTCACTTGGTCTTGAGACTAAGAGGAGG 11876 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||| | || || ||||| |||||||||||||||| | | Sbjct 10738 ATGCAGATCTTTGTGAAGACTCTGACTGGAAAAACCATCACTCTTGAAGTGGAGCCTAGT 10797 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || || |||||||| || |||||||| ||||| ||||| Sbjct 10798 GACACAATCGAAAATGTGAAGGCCAAGATTCAAGATAAAGAGGGTATCCCACCAGATCAG 10857 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| || || ||| | || ||| ||| || | || |||||||| Sbjct 10858 CAGAGGCTGATCTTTGCTGGAAAGCAGCTTGAAGATGGCCGTACTCTTTCAGATTACAAT 10917 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || |||||||||||||| | || | ||| | ||| || | ||||| Sbjct 10918 ATCCAAAAAGAATCCACTCTTCACCTGGTTCTCCGACTGAGAGGAGG 10964 Score = 118 bits (130), Expect = 9e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| |||||||| || || || || | || | ||| ||| | | | Sbjct 11194 ATGCAAATATTTGTCAAAACTTTGACAGGGAAGACCATAACCTTAGAAAGTGAACCTAGC 11253 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| |||||| ||||| || || |||||||| || || ||| Sbjct 11254 GACACAATAGAAAATGTCAAGACAAAAATCCAAGATAAAGAAGGTATTCCCCCAGACCAA 11313 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || ||||| || || || |||| ||| ||| || | || || |||||| Sbjct 11314 CAGCGTTTGATTTTTGCTGGTAAGCAACTAGAAGATGGCCGTACTCTATCGGACTACAAC 11373 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTG 22431 ||||| |||||||| || ||||| |||| ||| Sbjct 11374 ATTCAGAAAGAATCTACTCTACATCTAGTCTTG 11406 Score = 109 bits (120), Expect = 5e-19 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 22246 GGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAA 22305 |||||||| | ||||||||||| ||| | | |||||| | || || | ||| ||| Sbjct 12445 GGTAAAACCATTACTCTTGAAGTTGAACCAAGTGATACCATTGAGAATGTGAAAGCTAAA 12504 Query 22306 ATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAG 22365 |||||||| || || |||||||| || ||||| || | | || || || || ||||| Sbjct 12505 ATTCAAGATAAAGAAGGTATTCCTCCAGATCAGCAGAGGTTAATCTTCGCAGGTAAACAA 12564 Query 22366 TTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTA 22425 | || ||| ||| ||| | || || || |||||||| |||||||| || | ||| || Sbjct 12565 CTTGAAGATGGCCGAACCCTATCGGACTATAACATTCAGAAAGAATCAACTCTGCATCTA 12624 Query 22426 GTTTTGCGATTGCGCGGAGG 22445 || ||| | | || ||||| Sbjct 12625 GTCTTGAGGCTCCGAGGAGG 12644 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 22246 GGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAA 22305 || ||||| | || || ||||| || ||| ||||| | || | | ||| ||| Sbjct 13265 GGAAAAACAATTACACTAGAAGTCGAGCCCAGTGATACTATTGAAAACGTTAAAGCAAAG 13324 Query 22306 ATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAG 22365 || ||||||||||| || || ||||| |||||||||||||| || ||||| || |||||| Sbjct 13325 ATCCAAGACAAGGAAGGAATACCACCAGATCAACAACGTCTCATCTTTGCTGGTAAACAG 13384 Query 22366 TTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTA 22425 || || ||| | ||| | || || || || ||||| || || || || |||| || Sbjct 13385 TTGGAAGATGGAAGAACCCTGTCTGACTATAATATTCAGAAGGAGTCTACTCTACACTTG 13444 Query 22426 GTTTTGCGATTGCGCGGAGG 22445 |||||| || | || || || Sbjct 13445 GTTTTGAGACTTCGTGGTGG 13464 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||||||||| | || || ||||| |||| | ||||| ||| | | Sbjct 12646 ATGCAAATTTTTGTTAAAACCCTGACTGGCAAAACCATCACCTTAGAAGTTGAACCTAGT 12705 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| || || || || |||||||| || ||||| Sbjct 12706 GATACAATTGAGAATGTGAAAGCCAAAATCCAGGATAAAGAAGGTATTCCCCCAGATCAG 12765 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || ||||| | || ||| | | || | || ||||| || Sbjct 12766 CAGAGGTTAATCTTTGCTGGTAAACAACTTGAAGATGGCAGAACTTTGTCAGATTATAAT 12825 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || ||||| || |||| || ||| | | ||| | ||||| Sbjct 12826 ATCCAGAAGGAATCTACTCTACACTTGGTTCTCAGGTTGAGAGGAGG 12872 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||| | || || || || | || | ||||| ||| | | | Sbjct 10966 ATGCAAATATTCGTAAAGACTCTGACAGGGAAGACCATAACGTTAGAAGTTGAACCTAGC 11025 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || ||||| |||||| || || || || || || || || || || Sbjct 11026 GACACAATAGAAAATGTCAAAACAAAAATCCAGGATAAAGAAGGCATCCCTCCAGACCAG 11085 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || || ||||| |||||| | || ||| || || | || |||||||| Sbjct 11086 CAGAGATTGATCTTCGCCGGAAAACAGCTTGAAGATGGTCGTACTCTGTCTGATTACAAT 11145 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || ||||||||||| | || || ||| ||||| | | |||||| Sbjct 11146 ATCCAGAAAGAATCCACTCTTCACTTGGTTCTGCGACTTAGAGGAGGT 11193 >seq32926 Length=14205 Score = 96.9 bits (106), Expect = 3e-15 Identities = 157/227 (69%), Gaps = 7/227 (3%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || |||||| |||| || ||||| | || || ||||| || ||| Sbjct 14113 ATGCAGATATTCGTCAAAACTCTAACAGGAAAAACAATTACACTAGAAGTCGAGCCCAGT 14054 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||| | | || | | ||| ||| || ||||||||||| || || ||||| |||||| Sbjct 14053 GATGCTATTGAAAACGTTAAAGCAAAGATCCAAGACAAGGAAGGAATACCACCAGATCAA 13994 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || ||||| | ||| || ||| | ||| | || || || || Sbjct 13993 CAACGTCTCATTTTTGCTG-------GTTGGAAGATGGAAGAACCCTGTCTGACTATAAT 13941 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || || || || |||| || |||||| || | || || || Sbjct 13940 ATTCAGAAGGAGTCTACTGTACACTTGGTTTTGAGACTTCGTGGTGG 13894 >seq8748 Length=68017 Score = 95.1 bits (104), Expect = 1e-14 Identities = 158/225 (70%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 129929 CATACAGTTGTTCAAATTCTGAGCCGT-GTACGG-TGTCGAGCAACGGCGATTCACGCGG 129986 |||| | ||||||||||||| || | | | | || || || || |||||| || Sbjct 33994 CATATAATTGTTCAAATTCTTCTCCATAGCAAGTATGAAGACCA--GGTGATTCATCTGG 34051 Query 129987 ACACATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAATCGGGTACCCA 130046 ||||||||||||||||||| ||| | ||| ||||||||||| || | ||| || | ||| Sbjct 34052 ACACATCAAACTCCACATTTCATTCTTTTCAACTCGTTTCATGAATAGATCAGGAATCCA 34111 Query 130047 CAGGGCGTACAACAAATCTCGCGCTTTTCTATCCTCGGCACCCATGTTACGTTTCAGTTC 130106 | || || ||||| || || ||| | ||||| || |||| ||| || || Sbjct 34112 TAATGCATAAAACAAGTCCCGAGCTCGTTGTTCCTCTTTCCCTGTGTTCTTTTTGAGATC 34171 Query 130107 AAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGC 130151 ||||| || |||| || | |||||||| || | |||||| || Sbjct 34172 CAGGAAGTCAAAAATATCTGAATGCCACGGCTCCAAATAAATAGC 34216 >seq87354 Length=3251 Score = 82.4 bits (90), Expect = 6e-11 Identities = 270/416 (65%), Gaps = 8/416 (2%) Strand=Plus/Plus Query 48981 ACATTCGACCAGGCACCCTTAAAATCGTAGTTCATTAAAAATATTTTATCTAAATAATTT 49040 ||||| ||| ||||| | | || ||| ||||||| || || | ||| | ||| | | Sbjct 616 ACATTGCTCCATGCACCATAGTAGTCATAGCTCATTAAGAAAATGTAATCCATATATTGT 675 Query 49041 TGGGCATCGTTGTATTTAACCACGGCAATTTTGTCGTCGCCTGCGCTAATGGCGCTTGTT 49100 || || | ||| | || | |||||||||||| || || | ||| || |||| Sbjct 676 TGAGCTTGTGAGTAGTCGACATCTTCAATTTTGTCGTAACCCGCACCAATCGCTGATGTT 735 Query 49101 AATTCAAAATTACGGCCGGTTTCGCGTTCAAGATCGTCGAGCATTTCGCGTAATTCTTTC 49160 |||||| | | ||| || || ||| |||||| | || ||||| | || | |||| | Sbjct 736 AATTCATACTCACGACCTGTCTCGGCTTCAAGCTTATCAAGCATCGCTCGCAGCTCTTGC 795 Query 49161 AAGAGAACAACATAAGTGTGTCCGTCGTGTTGCGAATCGCCCAACAACGGATTCGCCCCT 49220 | | |||| || | | ||||| | ||||| || ||||| || || Sbjct 796 ATTAACGCAACGTATGCAGGGCCGTCAGCAACTGGGTCGCCTAAATTTGGATTAGCACCC 855 Query 49221 TTGCCGCCCGGAAATTCCCAATCTATGTCGACGCCGTCGAAAAATTTCCAAGTTAACAAA 49280 | || || || ||||||| || || || || |||||| | || ||||| ||| ||| Sbjct 856 TGACCACCAGGGTATTCCCAGTCAATATCTACACCGTCGTAGAACTTCCACGTTCTTAAA 915 Query 49281 AATTCGCGCACCGAATCTACAAACACGTCACGTTTATGC-GCATCGTGCATAAAGTA--- 49336 || || || || | |||||| ||| || || ||| |||| |||| || Sbjct 916 AACTCTTCCATTGATGCCACAAACGTGTCGCGATT-TGCTTTATCG---GTAAAATAAGC 971 Query 49337 AAATGGATCGGACAACGTCCAACCCCCGATGGATGGCAATACTTTTAAATTGGGAT 49392 |||||| || || || |||||||| || | ||||| || | ||| | || |||| Sbjct 972 AAATGGGTCTGATAAAGTCCAACCACCCACCGATGGTAAAATTTTCAGATCAGGAT 1027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418806014457340