Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_008689.1 Length=44857 Score E Sequences producing significant alignments: (Bits) Value seq64749 82.4 2e-11 >seq64749 Length=5359 Score = 82.4 bits (90), Expect = 2e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 40996 AAATATGAAGAACAAAAATCGATTCTTAAAGATAGAAATAGCTTTTCTAAAACTGATCAT 41055 || |||||||||||| || | || | ||||||||| | | ||||| |||| Sbjct 936 AAGTATGAAGAACAAGAAGCCGTTTTAGGCGATAGAAATTCTTATAGCAAAACCGATCCC 877 Query 41056 GATGCAACTTTTATGAGAATGAAGGAAGACCATATGAAAAATGGCCAACTTAAGCCAGGA 41115 || || ||||||||| | ||||| || || || |||||||| || || ||||| || || Sbjct 876 GACGCCACTTTTATGCGCATGAAAGAGGATCACATGAAAAACGGACAGCTTAAACCGGGT 817 Query 41116 TACAATTTACAAATA 41130 |||||| ||||||| Sbjct 816 TACAATGCACAAATA 802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143113836103208