Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_008717.1 Length=36415 Score E Sequences producing significant alignments: (Bits) Value seq11269 143 6e-30 >seq11269 Length=54388 Score = 143 bits (158), Expect = 6e-30 Identities = 156/202 (77%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 18597 ATGAAGCCTGACGCCTCTAACCACAACCCAGACCCGCGCTACCTGCGCGGGCTGCTCAAG 18656 ||||||||||||||||| |||||||| |||||||||| |||||||||||||||| || | Sbjct 10032 ATGAAGCCTGACGCCTCCAACCACAATCCAGACCCGCACTACCTGCGCGGGCTGGTCGAC 9973 Query 18657 AAAGCCGGCATCAGCCAGCGGCGCGCAGCCGAGCTGCTCGGCCT-CAGTGACAGGGTGAT 18715 ||||| || |||||||||| | ||||||||| |||||||||| ||| | || | Sbjct 9972 AAAGCAGGTGTCAGCCAGCGTCAGGCAGCCGAGTTGCTCGGCCTGTCGTGGCCTGG-CTT 9914 Query 18716 GCGCTATTACCTGAGCGAGGACATCA-AGGAGGGCTACCGCCCCGCGCCGTATACCGTCC 18774 ||| | |||||| |||| || ||| | || ||| || |||| || ||||| || | Sbjct 9913 CCGCAACTACCTGCGCGACGA-GTCACACCAGCTCTATCGAGCCGCACCCTATACAGTTC 9855 Query 18775 AGTTCGCCCTGGAGTGCCTGGC 18796 | ||| | || || |||||||| Sbjct 9854 AATTCTCTCTTGAATGCCTGGC 9833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116157255091064