Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq2234 107 1e-18 >seq2234 Length=154088 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| ||||||| | || ||||||||||| ||| | ||| ||| | Sbjct 12646 ATGCAAATTTTTGTTAAAACCCTGACTGGCAAAACCATCACCTTAGAAGTTGAACCTAGT 12705 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || ||||| |||||||| ||| | || | | || Sbjct 12706 GATACAATTGAGAATGTGAAAGCCAAAATCCAGGATAAAGAAGGTATTCCCCCAGATCAG 12765 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| | ||||||||||| |||||||| |||||| | |||| || | ||||| ||| Sbjct 12766 CAGAGGTTAATCTTTGCTGGTAAACAACTTGAAGATGGCAGAACTTTGTCAGATTATAAT 12825 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || ||||||||||||||||| || |||| | | || ||||||| Sbjct 12826 ATCCAGAAGGAATCTACTCTACACTTGGTTCTCAGGTTGAGAGGAGG 12872 Score = 102 bits (112), Expect = 6e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | ||||| || || || || ||||| ||| | |||| ||| | Sbjct 11194 ATGCAAATATTTGTCAAAACTTTGACAGGGAAGACCATAACCTTAGAAAGTGAACCTAGC 11253 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| |||||| |||||||| ||| | || | ||||| Sbjct 11254 GACACAATAGAAAATGTCAAGACAAAAATCCAAGATAAAGAAGGTATTCCCCCAGACCAA 11313 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| | | || |||||||| || |||||||||||| ||| | | || ||||| Sbjct 11314 CAGCGTTTGATTTTTGCTGGTAAGCAACTAGAAGATGGCCGTACTCTATCGGACTACAAC 11373 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT-ACGTTTACGAGGAGG 22060 |||||||| ||||||||||| ||| | || || | | ||| ||||||| Sbjct 11374 ATTCAGAAAGAATCTACTCTACATCTAGTCTTGAGGCTTA-GAGGAGG 11420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357338133663544