Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq2234 152 4e-32 seq32926 95.1 1e-14 >seq2234 Length=154088 Score = 152 bits (168), Expect = 4e-32 Identities = 169/223 (76%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 ||||| ||||| | ||| | |||||||||||||||||||| ||||| || |||||| Sbjct 12095 AGTCTTAAAACCAGATGCAGAGTAGATTCTTTTTGAATGTTATAATCCGACAGAGTACGG 12036 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 |||||| ||||| |||||||| | || | |||||| || || || ||||| |||||| Sbjct 12035 CCATCTTCTAGTTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGGGGAATTCCTTCT 11976 Query 114285 TTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGT 114343 ||||| || ||||| |||| | | ||||| ||| || | | |||||| || | || Sbjct 11975 TTGTCCTGGAT-TTTTGCTTTAACATTTTCAATGGTATCACTTGGTTCGACTTCTAATGT 11917 Query 114344 CACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 | ||||| || || ||||| ||||||||||| |||||| || Sbjct 11916 AATTGTTTTACCTGTTAGAGTCTTTACAAAAATTTGCATGCCT 11874 Score = 134 bits (148), Expect = 1e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 114168 CTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAA 114227 |||| ||||||||||| |||||||||||||| ||||||||||| | ||||||| | Sbjct 11636 CTCAGAACTAAATGTAATGTAGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCA 11577 Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287 ||||| | || |||||||| | || || | |||||| || || || || ||||||||| Sbjct 11576 TCTTCCAACTGCTTACCAGCAAAAATTAGCCTCTGTTGATCTGGGGGGATACCTTCTTTG 11517 Query 114288 TCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACC 114347 || ||| || ||| | | ||| | ||||| | | || || |||| ||| | Sbjct 11516 TCTTGAATTTTGGCTTTGACGTTTTCTATTGTGTCACTAGGCTCTACTTCCAAGGTGATG 11457 Query 114348 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 |||||||| || || ||||| || ||||| |||||| || Sbjct 11456 GTTTTGCCAGTTAGGGTTTTCACGAAAATTTGCATGCCT 11418 Score = 132 bits (146), Expect = 4e-26 Identities = 172/235 (73%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || || | || ||| | ||||| ||| | ||||| |||||||| ||||||||||| Sbjct 12335 ATCCCTCCTCTTAATCTGAGAACTAGATGGAGTGTAGACTCTTTTTGGATGTTGTAATCC 12276 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||||| ||||||||| ||||||||||| | || || | || || || || Sbjct 12275 GACAGGGTACGCCCATCTTCAAGCTGTTTACCAGCAAAAATCAGCCTTTGCTGATCTGGT 12216 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT-AGCTGTTCAACGGTGTCGGTGGATTC 114331 |||||||||||||| || ||| ||||||||| | | ||||| || ||| | | ||| Sbjct 12215 GGAATGCCTTCTTTATCTTGAAT-TTTTGTTTTGACATTTTCAATTGTATCGCTTGGTTC 12157 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 || || | ||| | || || || || || ||||| |||||||| |||||| || Sbjct 12156 TACTTCTAAGGTGATGGTCTTTCCAGTGAGGGTTTTAACAAAAATTTGCATGCCT 12102 Score = 127 bits (140), Expect = 2e-24 Identities = 161/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 || ||||| |||| ||||| ||||||||||| ||||||||||| || | |||||| Sbjct 11411 AGCCTCAAGACTAGATGTAGAGTAGATTCTTTCTGAATGTTGTAGTCCGATAGAGTACGG 11352 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 |||||| ||||| |||||||| | || | |||||||||||| || ||||| |||||| Sbjct 11351 CCATCTTCTAGTTGCTTACCAGCAAAAATCAAACGCTGTTGGTCTGGGGGAATACCTTCT 11292 Query 114285 TTGTCGGCAATCTTTTGT-TTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGT 114343 || || || |||||| || | | ||| | |||||| | | ||| || | ||| Sbjct 11291 TTATCTTGGAT-TTTTGTCTTGACATTTTCTATTGTGTCGCTAGGTTCACTTTCTAAGGT 11233 Query 114344 CACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || || || |||| |||||| ||||| || ||||| Sbjct 11232 TATGGTCTTCCCTGTCAAAGTTTTGACAAATATTTGCAT 11194 Score = 125 bits (138), Expect = 6e-24 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | |||| || ||| || || | || |||||||| || || |||||||| Sbjct 11195 ATACCTCCTCTAAGTCGCAGAACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCA 11136 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||||||| ||||||||| ||||| || ||| |||| | | ||| ||||| ||| Sbjct 11135 GACAGAGTACGACCATCTTCAAGCTGTTTTCCGGCGAAGATCAATCTCTGCTGGTCTGGA 11076 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT-AGCTGTTCAACGGTGTCGGTGGATTC 114331 || ||||||||||| || || ||||||||| | | ||| | |||||| | | ||| Sbjct 11075 GGGATGCCTTCTTTATCCTGGAT-TTTTGTTTTGACATTTTCTATTGTGTCGCTAGGTTC 11017 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || || |||||||| ||||| || || ||||| Sbjct 11016 AACTTCTAACGTTATGGTCTTCCCTGTCAGAGTCTTTACGAATATTTGCAT 10966 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || || | ||||| ||| | || ||||| |||||||||||||| || Sbjct 10739 ATACCACCTCTGAGCCTGAGAACTAGATGAAGTGTGGATTCCTTTTGAATGTTGTAGTCC 10680 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || | |||||| | |||||| ||||| |||| | || ||||| || ||| Sbjct 10679 GAGAGGGTTCTTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCGTTGTTGATCTGGA 10620 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||||||||| |||||| |||| | ||||| ||| || | | || Sbjct 10619 GGAATTCCTTCTTTGTCCTGAATCTTGGCCTTTACATTTTCAATGGTATCACTAGGCTCA 10560 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || |||||||| |||||||| |||||||||||||| Sbjct 10559 ACCTCTAGAGTGATGGTCTTGCCGGTGAGAGTTTTCACAAAAATCTGCAT 10510 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| || |||| |||||||| || || || || ||||| || ||| | |||||| Sbjct 12855 AACCAAGTGTAGAGTAGATTCCTTCTGGATATTATAATCTGACAAAGTTCTGCCATCTTC 12796 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 ||||||||||||||| |||| | | ||| || || || ||||| |||||||| || Sbjct 12795 AAGTTGTTTACCAGCAAAGATTAACCTCTGCTGATCTGGGGGAATACCTTCTTTATCCTG 12736 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 || || ||| | | |||| || || | | ||| || || | ||| | ||||| Sbjct 12735 GATTTTGGCTTTCACATTCTCAATTGTATCACTAGGTTCAACTTCTAAGGTGATGGTTTT 12676 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 ||| ||||| ||||| |||||||| |||||| || Sbjct 12675 GCCAGTCAGGGTTTTAACAAAAATTTGCATGCCT 12642 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| ||||||||||| || |||| ||||| || || ||||| || || || | Sbjct 13464 CCACCACGAAGTCTCAAAACCAAGTGTAGAGTAGACTCCTTCTGAATATTATAGTCAGAC 13405 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || | |||||| | ||||||||||| |||||||||| ||||| || || || Sbjct 13404 AGGGTTCTTCCATCTTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGATCTGGTGGT 13345 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||| ||||| |||||| ||| | | ||||| || || ||| ||||| Sbjct 13344 ATTCCTTCCTTGTCTTGGATCTTTGCTTTAACGTTTTCAATAGTATCACTGGGCTCGACT 13285 Query 114336 TCCACGGTCACCGTTTTGCC 114355 || | || | ||||| || Sbjct 13284 TCTAGTGTAATTGTTTTTCC 13265 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||||||||| || |||||||| | |||||| ||||||||| || || ||| Sbjct 10934 GTGGATTCTTTTTGGATATTGTAATCTGAAAGAGTACGGCCATCTTCAAGCTGCTTTCCA 10875 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| || || || || || || ||||| || |||||| || Sbjct 10874 GCAAAGATCAGCCTCTGCTGATCTGGTGGGATACCCTCTTTATCTTGAATCTTGGCCTTC 10815 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | ||| | ||||| | | || || || | || | ||||| || |||||||| Sbjct 10814 ACATTTTCGATTGTGTCACTAGGCTCCACTTCAAGAGTGATGGTTTTTCCAGTCAGAGTC 10755 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 10754 TTCACAAAGATCTGCAT 10738 Score = 89.7 bits (98), Expect = 4e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || || || || ||||| |||| ||| | || |||||||| |||||||| || || Sbjct 12647 ATGCCTCCTCGGAGCCTCAAGACTAGATGCAGAGTTGATTCTTTCTGAATGTTATAGTCC 12588 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || |||||||||||||||||| ||| |||| | | ||| || || ||| Sbjct 12587 GATAGGGTTCGGCCATCTTCAAGTTGTTTACCTGCGAAGATTAACCTCTGCTGATCTGGA 12528 Query 114273 GGAATGCCTTCTTTGTC 114289 ||||| |||||||| || Sbjct 12527 GGAATACCTTCTTTATC 12511 >seq32926 Length=14205 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/231 (69%), Gaps = 7/231 (3%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| ||||||||||| || |||| ||||| || || ||||| || || || | Sbjct 13894 CCACCACGAAGTCTCAAAACCAAGTGTACAGTAGACTCCTTCTGAATATTATAGTCAGAC 13953 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || | |||||| | |||||| | |||||||| ||||| || || || Sbjct 13954 AGGGTTCTTCCATCTTCCA-------ACCAGCAAAAATGAGACGTTGTTGATCTGGTGGT 14006 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||| ||||| |||||| ||| | | ||||| | || ||| ||||| Sbjct 14007 ATTCCTTCCTTGTCTTGGATCTTTGCTTTAACGTTTTCAATAGCATCACTGGGCTCGACT 14066 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 || | || | ||||| || || |||||||| || || ||||||||| || Sbjct 14067 TCTAGTGTAATTGTTTTTCCTGTTAGAGTTTTGACGAATATCTGCATGCCT 14117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419211521748432