Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq5663 84.2 4e-11 >seq5663 Length=92856 Score = 84.2 bits (92), Expect = 4e-11 Identities = 155/222 (70%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 42612 TTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGG 42671 ||||| || || || || | || || ||||||||||||| || ||||| || |||||| Sbjct 79247 TTCAATGCTATTGAAACTCTACCGTGTGTCAAGAAGAAGGCTGATTGGGCTCTTAACTGG 79306 Query 42672 ATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGG 42730 ||| || ||| || | || || ||| | | || || ||| | || || || || Sbjct 79307 ATC-AGCTCAGCGAGTGCTTCCTTTGGTGAGCGAGTAGTTGCATTTGCTGCAGTTGAAGG 79365 Query 42731 CATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGC 42789 || |||||||| ||| | || || || || |||||| | ||| ||| |||| | ||||| Sbjct 79366 AATATTCTTCTCTGGCTCTTTTGCTTCTATTTTCTGGTTGAAGAAGAGAGGT-TTGATGC 79424 Query 42790 CCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 | || | || ||| || || || || ||||| || |||| Sbjct 79425 CTGGTTTGACATTCAGCAATGAGCTAATAAGCAGAGATGAGG 79466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 942211650999360