Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_009514.1 Length=47021 Score E Sequences producing significant alignments: (Bits) Value seq14312 150 5e-32 >seq14312 Length=42616 Score = 150 bits (166), Expect = 5e-32 Identities = 313/462 (68%), Gaps = 8/462 (2%) Strand=Plus/Minus Query 5553 ATGACCCTGCGTGAATATGCCCGTATGTCACTGACTGAACGGGGTATTGGGGTTTCCAGT 5612 |||| |||||| || ||||| || ||| | || || || ||||| || |||| Sbjct 17384 ATGAGCCTGCGCGAGCTGGCCCGCGCTTCCCTGGCGGATCGCGGCATTGGCGTCGCCAGC 17325 Query 5613 TATAACCCGATGCAGATGGTCGGTGCGGCGTTCACACACAGTACGTCTGACTTCGGTAAT 5672 |||||||||||||||||||| ||| ||||| |||| || |||||||| | Sbjct 17324 ATGAACCCGATGCAGATGGTCGGCCTGGCTTTCACCCACACCACCAGCGACTTCGGCACC 17265 Query 5673 ATTCTGCTGGATGTTGCGAACAAAGCCATTCTGCAGGGCTGGGAAGATGCCCCTGAAACC 5732 || ||| | ||||| || ||| | | || ||| ||||||||| || || | |||||| Sbjct 17264 ATCCTGATCGATGTGGCCAACCGATCGATGCTGGCGGGCTGGGAGGAGGCGCTGGAAACC 17205 Query 5733 TATGAACAGTGGACGCGGAAAGGTCAGTTGTCTGATTTTAAAATTGCCCATCGTGTGGGT 5792 | | | |||||| || || |||| || || || | || || || || Sbjct 17204 TTCCAGCTCTGGACGAAAAAGGGCTTCCTGTCCGACTTCAAGACCATGCACCGCGTCGGC 17145 Query 5793 ATGGGGG-GCTTCAGTGCTCTGCGTCAGGTGCGTGAAGGGGCGGAATATAAATACGTCAC 5851 |||| | | ||| || | ||||| ||||| || || || || || || || ||||| || Sbjct 17144 CTGGGTGAGTTTCCGTCC-CTGCGCCAGGTTCGCGAGGGCGCCGAGTACAAGTACGTGAC 17086 Query 5852 CACCGGAGATAAA---CAGGCCACTATTGCACTGGCGACCTATGGCGAGCTGTTCAGTAT 5908 || | ||| | | |||| ||||| ||||| |||||| | ||||| || Sbjct 17085 TGTTGGTGGCCGCTCTCAGCCGA---TTGCCCTGGCCACCTACGGCGAGATTTTCAGCAT 17029 Query 5909 CACCCGTCAGGCCATTATCAATGATGATCTGAATATGCTGACCGATGTCCCGATGAAACT 5968 |||||| |||| ||| ||||| ||||| |||| ||||| ||||| ||||| || | Sbjct 17028 CACCCGCCAGGTCATCATCAACGATGACATGAACATGCTCACCGACATCCCGCGCAAGAT 16969 Query 5969 GGGCCGTGCGGCGAAATCCACTATTGCCGATCTGGTTTATGC 6010 |||| ||||| || |||| || | ||||||||||| || Sbjct 16968 GGGCATGGCGGCCAAGGCCACCATCGGTGATCTGGTTTACGC 16927 Score = 80.6 bits (88), Expect = 8e-11 Identities = 115/162 (71%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 4777 TCGACGGTGTGGCGGCGTCAATGGCGTCGGTCATTGCGATGGTGGGAAACCCGGTCATTA 4836 ||||||| |||| || || ||||| | ||||| || |||| | || | || | Sbjct 18187 TCGACGGCCTGGCCGCCTCGATGGCCACCGTCATCGCCATGGCCGCCGACACCATCTACA 18128 Query 4837 TGCCGGAAAACACCTTCATGATGATTCATAAACCATTTGGCTTTACGGGCGGTGATGCGG 4896 |||| || ||| | | |||||| | || |||| ||| | ||||||||| |||| Sbjct 18127 TGCCAGAGAACGCAATGATGATGGTGCACCGGCCATGGGGCATCCAGGGCGGTGAGGCGG 18068 Query 4897 AGGACATGCGCACCTATGCCGACCTGCTCGATAAGGTTGAGG 4938 | ||||||||| ||||||||||||||| || ||| | |||| Sbjct 18067 ACGACATGCGCCGCTATGCCGACCTGCTGGAAAAGATCGAGG 18026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150023814936456