Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_009603.1 Length=46365 Score E Sequences producing significant alignments: (Bits) Value seq1426 167 7e-37 >seq1426 Length=185344 Score = 167 bits (184), Expect = 7e-37 Identities = 208/280 (74%), Gaps = 4/280 (1%) Strand=Plus/Plus Query 42710 TCGCCGCCGATGTTCGGCAGACCGAG-GCAGTTGCCGTAGAAGCTGATGCCGCTGGTGAC 42768 ||||| || | | | |||| |||| ||| ||||||||| || |||||| | || Sbjct 70549 TCGCCCCCCACGGTGGGCACGCCGAAAGCA-TTGCCGTAGCCGCCGATGCCTTCGACCAC 70607 Query 42769 GCCGTGCACGACCCGCGCCGTGTCGGGGT-CGTCGGCCGCGCCGAAGCGCAGGGCGTCCA 42827 ||| | ||| | |||| || | || | || ||| | |||||||| ||| |||| || Sbjct 70608 GCCTTTCACCAGATGCGCGGTTTTCGGATGCGAGGGCAG-GCCGAAGCTCAGCGCGTTCA 70666 Query 42828 TGACCGCGACCGGGCGAGCGCCCATGGAGATGATGTCGCGGACGATGCCGCCCACACCCG 42887 | | |||| ||||| |||||||||| || || |||||| | ||||||||| || || | Sbjct 70667 TCGCGGCGATGGGGCGGGCGCCCATGGTGAAGACGTCGCGCAGGATGCCGCCGACGCCGG 70726 Query 42888 TCGCCGCGCCCTGGAAGGGCTCGATGAACGAGGGGTGGTTGTGACTCTCCGCCTTGAACG 42947 |||| |||||||| ||||||||| | |||||||||||||| || ||| |||||| Sbjct 70727 TCGCGGCGCCCTGATGCGGCTCGATGTAAGAGGGGTGGTTGTGGCTTTCCATCTTGAAGA 70786 Query 42948 TGACCGCCCATCCCTCGCCGACGTCGATGACGCCCGCGTT 42987 |||||||| || ||||||| ||||| ||||||||| || Sbjct 70787 TGACCGCCTGACCGTCGCCGATGTCGACGACGCCCGCATT 70826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147929107859464