Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_009760.1 Length=218948 Score E Sequences producing significant alignments: (Bits) Value seq56041 95.1 2e-14 seq102887 89.7 7e-13 >seq56041 Length=6609 Score = 95.1 bits (104), Expect = 2e-14 Identities = 120/161 (75%), Gaps = 3/161 (2%) Strand=Plus/Minus Query 157430 TGCGCACGAGTGATACCTACATACGCTAGGCGACGTTCTTCTTCTAATTGAACTGTATCA 157489 || ||||| || ||||||||||| || || ||||| |||||||| | | | || ||| Sbjct 5503 TGAGCACGGGTTATACCTACATAAGCAAGACGACGCTCTTCTTCAACGTTATCTTCATC- 5445 Query 157490 GATAGACTACGTGAATGCGGGAATAATCCCTCTTCCATACCAATCATAAATACGACTGGA 157549 |||| ||| || || || | ||| ||||||||||| |||| ||| || || ||| Sbjct 5444 GATACT-TACTTGG-TGTGGTAGTAACCCCTCTTCCATGCCAACCATGAACACATACGGA 5387 Query 157550 TACTCAAGTCCTTTCGAAGTATGAAGCGTCATTAATTGTAC 157590 ||||| | ||||| |||| ||| || |||| ||||||||| Sbjct 5386 TACTCCAAACCTTTTGAAGCATGCAGTGTCAGTAATTGTAC 5346 >seq102887 Length=1993 Score = 89.7 bits (98), Expect = 7e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 164077 ATTATTTTACTGCTGTTTTCAACTCTTTACCAGCTTTGAATGCCGGTACTTTTGTTGCAG 164136 |||| |||||||| ||||| | ||||||| |||||||| | || | |||| ||||| Sbjct 1956 ATTAGTTTACTGCGTCTTTCAGCGCTTTACCTGCTTTGAAAGAAGGAATGTTTGCTGCAG 1897 Query 164137 CAATTTCAATTTCTTCACCAGTTTGTGGGTTACGTCCCTTACGAGCCGCACGGTCACGAG 164196 |||| | || ||||||||||| |||||||| || ||| || ||||| ||||| Sbjct 1896 CAATCTGGATAGTCTCACCAGTTTGCGGGTTACGACCTGAACGCGCTGCACGCTCACGTA 1837 Query 164197 TTTCGAATGTACCAAAGCCGATTAACTGTACT 164228 ||| ||||||||||| | || | |||| Sbjct 1836 CAGAGAAAGTACCAAAGCCAACTAGCGCTACT 1805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 698927395908480