Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq2234 158 3e-33 seq32926 116 9e-21 seq137299 100 7e-16 >seq2234 Length=154088 Score = 158 bits (174), Expect = 3e-33 Identities = 181/242 (75%), Gaps = 6/242 (2%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| || || || ||||||| ||| ||| ||||| || || ||||| | | Sbjct 10736 CCACCTCTGAGCCTGAGAACTAGATGAAGTGTGGATTCCTTTTGAATGTTGTAGTCCGAG 10677 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| ||||| ||||||||||| || ||||||| || |||||| ||||| Sbjct 10676 AGGGTTCTTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCGTTGTTGA---TCTGGA 10620 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||||||||| ||||| || || || || || ||||| || | ||| || | || Sbjct 10619 GGAATTCCTTCTTTGTCCTGAATCTTGGCCTTTACATTTTCAATGGTATCACTAGGCTCA 10560 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATTC 288483 || || || ||||| ||||| ||||| ||||| || || || ||||||||| ||| | || Sbjct 10559 ACCTCTAGAGTGATGGTCTTGCCGGTGAGAGTTTTCACAAAAATCTGCATTTTGTAAATC 10500 Query 288484 TA 288485 || Sbjct 10499 TA 10498 Score = 158 bits (174), Expect = 3e-33 Identities = 160/207 (77%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330 |||| ||| |||||| |||||||| || || | || || || || ||||| | ||| Sbjct 11168 TGAAGAGTGGATTCTTTCTGGATATTGTAATCAGACAGAGTACGACCATCTTCAAGCTGT 11109 Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATT 288387 ||||| |||||||||| | ||| || ||||| ||| |||||||||||||||||| Sbjct 11108 TTTCCGGCGAAGATCAATCTCTGCTGG---TCTGGAGGGATGCCTTCTTTATCCTGGATT 11052 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447 || | ||| || |||||||| | ||||| | ||| ||||| | ||| || |||||||| Sbjct 11051 TTTGTTTTGACATTTTCTATTGTGTCGCTAGGTTCAACTTCTAACGTTATGGTCTTCCCT 10992 Query 288448 GTCAGAGTCTTGACGAATATCTGCATT 288474 ||||||||||| |||||||| |||||| Sbjct 10991 GTCAGAGTCTTTACGAATATTTGCATT 10965 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 |||| || || || |||| ||| ||||||||||||||| || || | || || || Sbjct 10955 AGTCGGAGAACCAGGTGAAGAGTGGATTCTTTTTGGATATTGTAATCTGAAAGAGTACGG 10896 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCT 288375 || ||||| | || ||||| || |||||||| | ||| ||| |||||| || ||| Sbjct 10895 CCATCTTCAAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCTGGTGGGATACCCTCT 10836 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 ||||| || || || || ||||| ||||| || | || || | || ||||| || ||| Sbjct 10835 TTATCTTGAATCTTGGCCTTCACATTTTCGATTGTGTCACTAGGCTCCACTTCAAGAGTG 10776 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||||||||| || || |||||||| Sbjct 10775 ATGGTTTTTCCAGTCAGAGTCTTCACAAAGATCTGCAT 10738 Score = 132 bits (146), Expect = 1e-25 Identities = 172/235 (73%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || | |||||| | || ||||| | || ||||||||| || ||||| | Sbjct 12108 CATG-CCTCCTCTGAGTCTTAAAACCAGATGCAGAGTAGATTCTTTTTGAATGTTATAAT 12050 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | || || || || ||||||| ||| || || || || || | |||||| ||| | Sbjct 12049 CCGACAGAGTACGGCCATCTTCTAGTTGCTTACCAGCAAAAATTAAACGCTGCTGA---T 11993 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 ||||| ||||||||||| ||||||||||| ||||| || ||||| || | ||| || | Sbjct 11992 CTGGGGGAATTCCTTCTTTGTCCTGGATTTTTGCTTTAACATTTTCAATGGTATCACTTG 11933 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| ||||| | || || || || || || |||||||| || || || ||||| Sbjct 11932 GTTCGACTTCTAATGTAATTGTTTTACCTGTTAGAGTCTTTACAAAAATTTGCAT 11878 Score = 123 bits (136), Expect = 6e-23 Identities = 145/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| || || || ||||| | || || || || ||||||| ||| || || || || Sbjct 11385 TTCTTTCTGAATGTTGTAGTCCGATAGAGTACGGCCATCTTCTAGTTGCTTACCAGCAAA 11326 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| ||||||||| |||||| || ||||||||||| |||||||| | || || Sbjct 11325 AATCAAACGCTGTTGG---TCTGGGGGAATACCTTCTTTATCTTGGATTTTTGTCTTGAC 11269 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 |||||||| | ||||| | ||| ||| | || || |||||||| |||| ||| || Sbjct 11268 ATTTTCTATTGTGTCGCTAGGTTCACTTTCTAAGGTTATGGTCTTCCCTGTCAAAGTTTT 11209 Query 288459 GACGAATATCTGCAT 288473 ||| ||||| ||||| Sbjct 11208 GACAAATATTTGCAT 11194 Score = 114 bits (126), Expect = 3e-20 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||||||||| || || || | || || || || ||||| || || || || || || Sbjct 11613 TTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCATCTTCCAACTGCTTACCAGCAAA 11554 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 || || | ||||||| |||||| || |||||||| || || ||||| ||||| || Sbjct 11553 AATTAGCCTCTGTTGA---TCTGGGGGGATACCTTCTTTGTCTTGAATTTTGGCTTTGAC 11497 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||||||||| | || || | |||||||| | ||||| || || || || || || || Sbjct 11496 GTTTTCTATTGTGTCACTAGGCTCTACTTCCAAGGTGATGGTTTTGCCAGTTAGGGTTTT 11437 Query 288459 GACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 11436 CACGAAAATTTGCAT 11422 Score = 114 bits (126), Expect = 3e-20 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || ||||||||||| || | | || | || ||||| | |||||| || || || Sbjct 12837 TTCCTTCTGGATATTATAATCTGACAAAGTTCTGCCATCTTCAAGTTGTTTACCAGCAAA 12778 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||| | | ||| ||| |||||| || |||||||||||||||||||| |||||||| Sbjct 12777 GATTAACCTCTGCTGA---TCTGGGGGAATACCTTCTTTATCCTGGATTTTGGCTTTCAC 12721 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || || | ||| || | ||| ||||| | ||||| || || || ||||| || || Sbjct 12720 ATTCTCAATTGTATCACTAGGTTCAACTTCTAAGGTGATGGTTTTGCCAGTCAGGGTTTT 12661 Query 288459 GACGAATATCTGCAT 288473 || || || ||||| Sbjct 12660 AACAAAAATTTGCAT 12646 Score = 111 bits (122), Expect = 4e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||||||||| || || || | || || || || ||||| | ||||| || || || Sbjct 12296 TCTTTTTGGATGTTGTAATCCGACAGGGTACGCCCATCTTCAAGCTGTTTACCAGCAAAA 12237 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | || ||| ||| || ||||||||||| || ||||| | ||| || ||| Sbjct 12236 ATCAGCCTTTGCTGATCTGGTGGAATGCCTTCTTTATCTTGAATTTTTGTTTTGACATTT 12177 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | |||||| | ||||||||| | ||||| ||||| || || || || || || Sbjct 12176 TCAATTGTATCGCTTGGTTCTACTTCTAAGGTGATGGTCTTTCCAGTGAGGGTTTTAACA 12117 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 12116 AAAATTTGCAT 12106 Score = 107 bits (118), Expect = 5e-18 Identities = 150/208 (72%), Gaps = 7/208 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || ||||| || | || ||||| | || |||||| || || ||||||| Sbjct 12648 CATG-CCTCCTCGGAGCCTCAAGACTAGATGCAGAGTTGATTCTTTCTGAATGTTATAGT 12590 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | || || || || ||||| | |||||| ||||||||||| | | ||| ||| | Sbjct 12589 CCGATAGGGTTCGGCCATCTTCAAGTTGTTTACCTGCGAAGATTAACCTCTGCTGA---T 12533 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 |||| || ||||||||||| || ||||| |||||||| || || || | ||| || | Sbjct 12532 CTGGAGGAATACCTTCTTTATCTTGAATTTTAGCTTTCACATTCTCAATGGTATCACTTG 12473 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCC 288446 ||| ||||| || || || || || || Sbjct 12472 GTTCAACTTCAAGAGTAATGGTTTTACC 12445 Score = 107 bits (118), Expect = 5e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || ||||||||||| | || || | ||| ||||| || ||||| || || ||| Sbjct 13428 TCCTTCTGAATATTATAGTCAGACAGGGTTCTTCCATCTTCCAACTGTTTACCAGCAAAG 13369 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || ||||| |||||| ||| |||||||| || || ||||| || ||||| |||||| Sbjct 13368 ATGAGACGTTGTTGATCTGGTGGTATTCCTTCCTTGTCTTGGATCTTTGCTTTAACGTTT 13309 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCC 288446 || |||| ||| || | || ||||| || || || || || || Sbjct 13308 TCAATAGTATCACTGGGCTCGACTTCTAGTGTAATTGTTTTTCC 13265 >seq32926 Length=14205 Score = 116 bits (128), Expect = 9e-21 Identities = 140/191 (73%), Gaps = 7/191 (4%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || ||||||||||| | || || | ||| ||||| || || || || Sbjct 13930 TCCTTCTGAATATTATAGTCAGACAGGGTTCTTCCATCTTCCAA-------CCAGCAAAA 13982 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || ||||| |||||| ||| |||||||| || || ||||| || ||||| |||||| Sbjct 13983 ATGAGACGTTGTTGATCTGGTGGTATTCCTTCCTTGTCTTGGATCTTTGCTTTAACGTTT 14042 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| ||| || | || ||||| || || || || || || || ||||| |||||| Sbjct 14043 TCAATAGCATCACTGGGCTCGACTTCTAGTGTAATTGTTTTTCCTGTTAGAGTTTTGACG 14102 Query 288463 AATATCTGCAT 288473 ||||||||||| Sbjct 14103 AATATCTGCAT 14113 >seq137299 Length=1270 Score = 100 bits (110), Expect = 7e-16 Identities = 252/380 (66%), Gaps = 10/380 (3%) Strand=Plus/Plus Query 72416 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 72475 ||| || || | || ||| ||||||| ||||| |||||||| |||| |||| || Sbjct 513 CCAGGCTTCGACCTCTGAGCTGTATGGCTTGGTGCAGGAAATTCCACAGAAAGAAACCAC 572 Query 72476 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 72535 || || ||||| || ||||| |||| || || || ||||||| || |||||| | Sbjct 573 GCCATTCTATCCGCGCAGCCCGTACGCGGTGGCGAAAATGTACGCGTACTGGATCGCTGT 632 Query 72536 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 72595 || ||||||||||| || || || | |||||| ||||| ||||| || ||| Sbjct 633 GAACTACCGTGAGTCTTACGGTATTTACGCTTGCAACGGGATTTTGTTCAACCATGAGTC 692 Query 72596 TCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATAT--- 72652 || | ||| | || ||||| || || |||| | || | || ||||| Sbjct 693 ACCGCGTCGTGGCGAGACCTTTGTGACACGCAAGGTCACCAGGGGACTGGCCAATATCGC 752 Query 72653 TTTCAATGGTGTCGAAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGG 72712 ||| ||| | || ||||| | ||| | || || || ||| | | || ||||| Sbjct 753 TTT---GGGTCTGGAGCAATGCCTTTATATGGGCAACATGGATTCGTTGCGCGACTGGGG 809 Query 72713 ATATGCGAAGGATTACGT--AGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGAT 72770 |||| ||||| || || | ||| |||| |||||||||| || || ||||| Sbjct 810 GCATGCCAAGGACTATGTGCGCATGCA--GTGGATGATGCTGCAGCAGGAGCAGCCGGAA 867 Query 72771 GACTATGTGATTGCAACAGG 72790 |||| ||| ||||| || || Sbjct 868 GACTTTGTCATTGCTACCGG 887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176930255060008