Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq32546 134 3e-26 seq137299 100 6e-16 >seq32546 Length=14506 Score = 134 bits (148), Expect = 3e-26 Identities = 363/548 (66%), Gaps = 8/548 (1%) Strand=Plus/Plus Query 297161 TCGATCTTACCTTTGAA-TCCTCGATACCACGGTTTCATTTCGACGAGATCTTCTCCAGC 297219 || |||| |||| |||| | || |||||| || |||||| | |||| || ||| | Sbjct 9817 TCAATCTGACCTCTGAAGTTCTT-ATACCATGGATTCATTGGCAAAGGATCCTCACCATC 9875 Query 297220 AATCAATCGCTTCACGTTGTCTACGATGTCTTTTGGATTGTAACTAGGGATATTAGTCGA 297279 || ||| | | || | ||||| |||| | ||||||||| | || | ||||| Sbjct 9876 AAGTAATTTGTAAATATTTTTTACGAGGTCTCTAGGATTGTAATTTGGAACTTTAGTACT 9935 Query 297280 CCAACCGGTACCGATTCCACTCGAACCATTCACCAGAATGCTCGGAATAACAGGCACATA 297339 ||| || ||||| || || | ||||||||| |||| | ||||||| ||| ||||| Sbjct 9936 CCATCCTGTACCAATACCTTCAGCACCATTCACGAGAACCATGGGAATAATAGGTACATA 9995 Query 297340 ATACTCTGGTTCGATCTTGTCACCGTCATCATACAGATATTTCAGAAGATTATCGTCCGT 297399 ||||||||| || || || | |||||||||||||| | || ||| | ||| Sbjct 9996 ATACTCTGGCTCAATTTTTAAATTATCATCATACAGATAATGCAACAGAGGAGAGTCTAA 10055 Query 297400 ATCGACGAAAACCTGTCGAGTCTGAGGGTTCAGTTTTGTGAAAATATATCGTGCACTCGC 297459 | | || | ||| || | || ||||| ||||||| || |||| | ||| || Sbjct 10056 ACCAGAAAATAGATGTTTAGACACAGAATTCAGCATTGTGAAGATGTATCTGGGACTTGC 10115 Query 297460 GTGATCCTTACCACCCTGCAATCTCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGAT 297519 ||| || ||||| || | | | ||| ||||| || | || ||||| ||||| Sbjct 10116 AGCATCTTTGCCACCTTGTAGACGAGTACCAAACTGTCCTACTGGTAACAAGACATTGAT 10175 Query 297520 GTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCTTC 297579 |||||||||||| ||| |||| || || | | || || || || | ||||| Sbjct 10176 GTTATTGCTTCCCACAAAATCTTGCGCTAAACCAATAATTGTTCCAGCCAATGCAGCTTC 10235 Query 297580 GCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTC 297639 ||||| || || || ||||| ||||| | || ||||||||||| || || || Sbjct 10236 ACCATGATGGTAAGCAGATTGCTCAGCAACTGATCCAACCAACTGTGCAACTTTGACTTC 10295 Query 297640 GGTCGTCAA--ATTGCGCTTGAAAGC-TGAATATATCACTTTCCGTTGAGAAGGTTTGAA 297696 |||| | ||| | || || || | | | | ||||| |||||| |||||| || Sbjct 10296 --TCGTTTATCATT-CCTTTTAAGGCAAGTAAAAAGGACTTTTCGTTGACCAGGTTTAAA 10352 Query 297697 ACCATCAA 297704 || |||| Sbjct 10353 GCCGTCAA 10360 >seq137299 Length=1270 Score = 100 bits (110), Expect = 6e-16 Identities = 252/380 (66%), Gaps = 10/380 (3%) Strand=Plus/Plus Query 68405 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 68464 ||| || || | || ||| ||||||| ||||| |||||||| |||| |||| || Sbjct 513 CCAGGCTTCGACCTCTGAGCTGTATGGCTTGGTGCAGGAAATTCCACAGAAAGAAACCAC 572 Query 68465 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 68524 || || ||||| || ||||| |||| || || || ||||||| || |||||| | Sbjct 573 GCCATTCTATCCGCGCAGCCCGTACGCGGTGGCGAAAATGTACGCGTACTGGATCGCTGT 632 Query 68525 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 68584 || ||||||||||| || || || | |||||| ||||| ||||| || ||| Sbjct 633 GAACTACCGTGAGTCTTACGGTATTTACGCTTGCAACGGGATTTTGTTCAACCATGAGTC 692 Query 68585 TCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATAT--- 68641 || | ||| | || ||||| || || |||| | || | || ||||| Sbjct 693 ACCGCGTCGTGGCGAGACCTTTGTGACACGCAAGGTCACCAGGGGACTGGCCAATATCGC 752 Query 68642 TTTCAATGGTGTCGAAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGG 68701 ||| ||| | || ||||| | ||| | || || || ||| | | || ||||| Sbjct 753 TTT---GGGTCTGGAGCAATGCCTTTATATGGGCAACATGGATTCGTTGCGCGACTGGGG 809 Query 68702 ATATGCGAAGGATTACGT--AGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGAT 68759 |||| ||||| || || | ||| |||| |||||||||| || || ||||| Sbjct 810 GCATGCCAAGGACTATGTGCGCATGCA--GTGGATGATGCTGCAGCAGGAGCAGCCGGAA 867 Query 68760 GACTATGTGATTGCAACAGG 68779 |||| ||| ||||| || || Sbjct 868 GACTTTGTCATTGCTACCGG 887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1100333148166600