Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq68 113 5e-20 seq8748 95.1 1e-14 seq57698 87.8 2e-12 seq51 87.8 2e-12 >seq68 Length=444459 Score = 113 bits (124), Expect = 5e-20 Identities = 440/671 (66%), Gaps = 38/671 (6%) Strand=Plus/Plus Query 10630 CTCATTGAGGAGGTTCGCCAAGTCGGCACCAGAGAAGCCCGTCGTTTGCTTTGCG--ATG 10687 ||| || | ||||||| | ||| || || || ||||||| ||| || ||| ||| Sbjct 24765 CTCGTTCACGAGGTTCATGAGGTCAGCGCCCGAAAAGCCCGGCGT--GCCGCGCGCAATG 24822 Query 10688 GCGTGTAGCTTCACATCGTCAGCCAA----CTTCTTGTCTCTGGCGTGGACACCCAAAAT 10743 | | | || | ||||||| ||||| | |||| | |||||| || || || Sbjct 24823 GTGCGCAGGTCCACATCGGG-GCCAAGCGGCACCTTG---CGGGCGTGCACGGTCAGGAT 24878 Query 10744 CTTCTCGCGACCGCGCACA-CTGGGTAGGGACACGGTGATCTTACGATCAAAGCGACCTG 10802 ||||||||| || | | |||| || ||| ||||| || || ||||| || | Sbjct 24879 CTTCTCGCGGCCCTTGATGTCGGGGTTCGG-CACATGGATCTGGCGGTCGAAGCGGCCGG 24937 Query 10803 GGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGC 10862 |||| || || || ||| || | ||| | ||||| |||||||||| || | | | Sbjct 24938 GGCGCAGCAGCGCCGGGTCCAGCACATCCTTACGGTTGGTCGCCGCGACGATGATCACAC 24997 Query 10863 CCGTCTCGTTA---TCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGC 10919 | || || || || || |||||||| || || || || | || ||||||| Sbjct 24998 CT---TCATTTGCCTCGAACCCGTCCATCTCGACCAGAAGCTGGTTCAGTGTCTGTTCGC 25054 Query 10920 GTTCATCATT--CGCGGGC-ATACC-AC-CCGCACTGCGTTGCTTACCGACGGCGTCAAT 10974 |||| ||||| ||| | | ||||| || |||| | || || | |||||||| || Sbjct 25055 GTTCGTCATTGCCGCCGCCGATACCCACGCCGCGC-GCACGGC----CCACGGCGTCGAT 25109 Query 10975 TTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGGAC 11034 || ||||| || ||||| || || ||| | ||| ||| || || || || || Sbjct 25110 CTCGTCGATAAACACGATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTCGCGCAC 25169 Query 11035 TCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGGCGGAACATTG-GATGA 11093 | |||||||| || || ||||||||||| || | || | || || | || || Sbjct 25170 ACGGGATGCACCGACCCCAACGAACATTTCCACGAAGTCGGAACCCGAG-ATGGTGAAGA 25228 Query 11094 AGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAGGTT 11153 | || ||| | |||||||||||||| || ||||| ||||| || ||||| || || Sbjct 25229 ACGGCACGCCCGCCTCACCCGCGATGGCGCGCGCGAGCAGGGTTTTACCCGTGCCGGGGG 25288 Query 11154 TCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC---ACTTCCAAAGTAGCGCTCAG 11210 || | || || ||||| |||||| || | || || ||| | | | | Sbjct 25289 GACCGACCAGCAGCGCACCTTTGGGGATCTTGCCGCCGAGACGCGAAAACTTCTG--CGG 25346 Query 11211 GTTGTTTAAGGAAGTCCACGATTTCTTCCAATTCATCCTTCGCAGCGTCGATGCCTTCAA 11270 |||| ||||| || ||||| ||||||| || ||||| || |||||||||| | | Sbjct 25347 GTTG-CGCAGGAATTCGACGATCTCTTCCAGCTCTTCCTTGGCCTCGTCGATGCCGGCCA 25405 Query 11271 CGTCACTGAAG 11281 ||||| |||| Sbjct 25406 CGTCATCGAAG 25416 >seq8748 Length=68017 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 114511 AGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTG 114570 ||| || || | |||||| ||||||||||| || || ||| || ||||| |||||||| Sbjct 32987 AGTATATTCAACAATTTCTGTACACAAATTGCTACACTGAATTGTTCCCAAATTCTTTTG 33046 Query 114571 ATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 114630 |||||| || | ||||| ||||||||||| | |||||| || || || || || ||| Sbjct 33047 ATTTGATTTCCTATTACAAGCATCCTTGTATAACATGTAAGGTGTTCCGGTTTCAACTTG 33106 Query 114631 GGACTTGAGAATAGC 114645 || | | |||||| Sbjct 33107 CGATTCAATAATAGC 33121 >seq57698 Length=6283 Score = 87.8 bits (96), Expect = 2e-12 Identities = 200/294 (68%), Gaps = 18/294 (6%) Strand=Plus/Minus Query 10786 ACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGC 10845 ||| ||||| |||||||| || || | || | ||||| | ||| | |||||| ||||| Sbjct 5068 ACGGTCAAAACGACCTGGACGAAGTAATGCTTTATCAAGAACATCTACGCGGTTAGTCGC 5009 Query 10846 CGCGATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAG-AGTTGAT 10904 || || || | | ||| | | ||||| |||||||||||| |||| | ||| | Sbjct 5008 AGCAATAACGATAACGCCTTCATTGCCTTCAAAACCATCCATCTCA-ACAAGCATTTGGT 4950 Query 10905 TGATGGTTTGTTCGCGTTCATCATTCGCGGGCA-TACC---ACCCGCACTGCGTTGCTTA 10960 | | |||||| || || ||||||| | || ||| ||| | || || || | Sbjct 4949 TTAAGGTTTGCTCACGCTCATCAT----GACCACCACCAGTACCTGAACCACGATGACGA 4894 Query 10961 CCGACGGCGTCAATTTCATCGATGAAAACGATACA---CGGTTGA-TTTTCACGGGCAAC 11016 || || || ||||| ||||| || || | |||||| || ||| |||| || Sbjct 4893 CCAACAGCATCAATCTCATCAATAAAGATGATACAAGGCGCATGACGTTTC----GCTTG 4838 Query 11017 TTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAA 11070 |||||| ||||| || || | | ||||| ||||| || |||||||| ||||| Sbjct 4837 TTCAAACATATCACGAACACGCGATGCACCTACACCAACGAACATTTCGACAAA 4784 >seq51 Length=473680 Score = 87.8 bits (96), Expect = 2e-12 Identities = 234/352 (66%), Gaps = 18/352 (5%) Strand=Plus/Plus Query 10730 TGGACACCCAAAATCTTCTCGCGACCGCGCACACTGGGTAGGGACACGGTGATCTTACGA 10789 ||||| || ||| | ||| || || |||||| || | | ||| || || ||| Sbjct 102551 TGGACTTTCAGAATATGCTCACGGCCACGCACATCTGGCAAGCCCACAACGACCTGACGG 102610 Query 10790 TCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCG 10849 || ||||||||||| || | | ||| | || | | ||| ||||| || || ||| Sbjct 102611 TCGAAGCGACCTGGACGTAATAAGGCAGCATCCAATACATCCGGACGGTTGGTGGCGGCG 102670 Query 10850 ATGACAACGATGCCCGTCTCGTTATCA---AAGCCATCCATCTCAGTCAAGAGTTGATTG 10906 || | || || || || ||| || ||||| ||||||||| || | || || Sbjct 102671 ATAATAATAATACCT---TCATTACCATCGAAGCCGTCCATCTCAACCAGCATCTGGTTT 102727 Query 10907 ATGGTTTGTTCGCGTTCATCATTCGCGGGCAT-ACC---ACCCGCACTGCGTTGCTTACC 10962 | |||||| || || ||||||| || || ||| ||| || | || ||| || Sbjct 102728 AAGGTTTGCTCACGCTCATCAT----GGCCACCACCTAAACCGGCGCCACGCTGCCGGCC 102783 Query 10963 GACGGCGTCAATTTCATCGATGAAAACGATACACGGTT--GATTTTCACGGGCAACTTCA 11020 ||||||||||| |||||||| || | || || ||| | |||| ||| || Sbjct 102784 TACGGCGTCAATCTCATCGATAAAGATAATGCAAGGTGCCGCTTTTTT--GGCTTGCTCG 102841 Query 11021 AAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAAT 11072 || || || || || | | |||||||||||| ||||||||||| ||||||| Sbjct 102842 AACATGTCGCGCACCCGCGAGGCACCGACACCGACAAACATTTCAACAAAAT 102893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596007792206880