Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2234 150 2e-31 seq87354 113 4e-20 >seq2234 Length=154088 Score = 150 bits (166), Expect = 2e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285 ||||| || |||||||| | || || |||||||| ||||||||||| | | ||| ||| Sbjct 12323 AATCTGAGAACTAGATGGAGTGTAGACTCTTTTTGGATGTTGTAATCCGACAGGGTACGC 12264 Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345 | ||||||||||| || || ||| |||| |||| ||||| || || ||||| |||||| Sbjct 12263 CCATCTTCAAGCTGTTTACCAGCAAAAATCAGCCTTTGCTGATCTGGTGGAATGCCTTCT 12204 Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405 || ||||| |||||| || ||| || | |||||| | | || ||||||| || Sbjct 12203 TTATCTTGAATTTTTGTTTTGACATTTTCAATTGTATCGCTTGGTTCTACTTCTAAGGTG 12144 Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | |||||| || || | ||||| || ||||||||||| Sbjct 12143 ATGGTCTTTCCAGTGAGGGTTTTAACAAAAATTTGCAT 12106 Score = 138 bits (152), Expect = 1e-27 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 |||||||| | || |||||||| ||||||||||| || | | || || | ||||| Sbjct 11402 ACTAGATGTAGAGTAGATTCTTTCTGAATGTTGTAGTCCGATAGAGTACGGCCATCTTCT 11343 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 || ||||| || ||| |||| | ||||| ||||| || ||||| |||||||| ||||| Sbjct 11342 AGTTGCTTACCAGCAAAAATCAAACGCTGTTGGTCTGGGGGAATACCTTCTTTATCTTGG 11283 Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTT-CTACAGTTACGGTCTT 64413 |||||| ||| ||| || | ||| || | | || ||||| ||| |||| |||||| Sbjct 11282 ATTTTTGTCTTGACATTTTCTATTGTGTCGCTAG-GTTCACTTTCTAAGGTTATGGTCTT 11224 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || ||||||||||| || || |||||||| Sbjct 11223 CCCTGTCAAAGTTTTGACAAATATTTGCAT 11194 Score = 136 bits (150), Expect = 4e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288 || || |||||||||| || ||||| |||||||||||||| || | || ||| | | Sbjct 10724 CTGAGAACTAGATGAAGTGTGGATTCCTTTTGAATGTTGTAGTCCGAGAGGGTTCTTCCA 10665 Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 ||||| | || || || ||| | || | || || || || ||||||||||||||||| Sbjct 10664 TCTTCCAATTGTTTTCCAGCAAAGATCAATCGTTGTTGATCTGGAGGAATTCCTTCTTTG 10605 Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 || || || || ||||||| || | ||||||| | || || |||| ||| | | Sbjct 10604 TCCTGAATCTTGGCCTTTACATTTTCAATGGTATCACTAGGCTCAACCTCTAGAGTGATG 10545 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||||||||||| | |||||| || ||||| |||||||| Sbjct 10544 GTCTTGCCGGTGAGAGTTTTCACAAAAATCTGCATTTT 10507 Score = 129 bits (142), Expect = 6e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||| | || ||||||||||||||||| ||||| | | || || | ||||| Sbjct 12086 ACCAGATGCAGAGTAGATTCTTTTTGAATGTTATAATCCGACAGAGTACGGCCATCTTCT 12027 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 || ||||| || ||| |||| | |||||||| || || |||||||||||||| || || Sbjct 12026 AGTTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGGGGAATTCCTTCTTTGTCCTGG 11967 Query 64355 ATTTTTTGCTTTACAACCTCCACTG-TATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 |||||| |||||| | | || || |||||| | || ||||||| || | || || Sbjct 11966 ATTTTT-GCTTTAACATTTTCAATGGTATCACTTGGTTCGACTTCTAATGTAATTGTTTT 11908 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || | ||| ||||| ||||||||||| Sbjct 11907 ACCTGTTAGAGTCTTTACAAAAATTTGCAT 11878 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||| || || |||| ||| | || ||||||||||| ||||||||||| | Sbjct 11649 ACCTCCTCTCAACCTCAGAACTAAATGTAATGTAGATTCTTTTTGGATGTTGTAATCAGA 11590 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | ||||| | |||||| || ||| |||| |||| ||| || || || || Sbjct 11589 AAGAGTACGACCATCTTCCAACTGCTTACCAGCAAAAATTAGCCTCTGTTGATCTGGGGG 11530 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 || |||||||| ||||| ||||| ||||| || || | ||| |||| | || | Sbjct 11529 GATACCTTCTTTGTCTTGAATTTTG-GCTTTGACGTTTTCTATTGTGTCACTAGGCTCTA 11471 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| | || | ||| ||||| || | ||||| |||||||||||||| Sbjct 11470 CTTCCAAGGTGATGGTTTTGCCAGTTAGGGTTTTCACGAAAATTTGCAT 11422 Score = 125 bits (138), Expect = 7e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || |||||||| || || |||||||| | | || || | ||||||||||| Sbjct 11168 TGAAGAGTGGATTCTTTCTGGATATTGTAATCAGACAGAGTACGACCATCTTCAAGCTGT 11109 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || ||||| | || | | ||||||||| ||||| || |||||||| || || |||||| Sbjct 11108 TTTCCGGCGAAGATCAATCTCTGCTGGTCTGGAGGGATGCCTTCTTTATCCTGGATTTTT 11049 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 || ||| || | ||| || | | || ||||||| |||| |||||| || ||| Sbjct 11048 GTTTTGACATTTTCTATTGTGTCGCTAGGTTCAACTTCTAACGTTATGGTCTTCCCTGTC 10989 Query 64421 AAAGTTTTTACGAAAATTTGCATT 64444 | ||| |||||||| ||||||||| Sbjct 10988 AGAGTCTTTACGAATATTTGCATT 10965 Score = 122 bits (134), Expect = 9e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| || ||||||||||| || |||||||||| | || || | ||| Sbjct 10949 AGAACCAGGTGAAGAGTGGATTCTTTTTGGATATTGTAATCTGAAAGAGTACGGCCATCT 10890 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||| || ||| | || |||| |||||| || || || || || ||||| ||| Sbjct 10889 TCAAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCTGGTGGGATACCCTCTTTATCT 10830 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | ||| |||| | |||||||| | ||| | ||| Sbjct 10829 TGAATCTTGGCCTTCACATTTTCGATTGTGTCACTAGGCTCCACTTCAAGAGTGATGGTT 10770 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || |||| ||| || || || || ||||| Sbjct 10769 TTTCCAGTCAGAGTCTTCACAAAGATCTGCAT 10738 Score = 113 bits (124), Expect = 4e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || ||||| ||||| |||||||| || | | || || | ||||| |||||| Sbjct 11852 TGAAGGGTTGATTCCTTTTGGATGTTGTAGTCCGACAGAGTACGTCCATCTTCTAGCTGC 11793 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 ||||| ||| | || | || || || || ||||| || ||||| || ||||| | |||| Sbjct 11792 TTGCCCGCAAAGATTAATCGTTGTTGATCAGGAGGGATACCTTCCTTATCTTG-AATTTT 11734 Query 64361 TGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419 ||||| ||| || | |||||||| | || ||||||| || | ||||| || || Sbjct 11733 AGCTTTGACATTTTCAATTGTATCACTTGGCTCAACTTCTAGTGTAATTGTCTTCCCAGT 11674 Query 64420 CAAAGTTTTTACGAAAATTTGCAT 64443 | |||||| ||||| |||||||| Sbjct 11673 AAGAGTTTTGACGAAGATTTGCAT 11650 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || || || || ||||||| | || | | |||||||| || || || Sbjct 12842 GTAGATTCCTTCTGGATATTATAATCTGACAAAGTTCTGCCATCTTCAAGTTGTTTACCA 12783 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || | || |||||| || || ||||| |||||||| || || ||||| ||||| Sbjct 12782 GCAAAGATTAACCTCTGCTGATCTGGGGGAATACCTTCTTTATCCTGGATTTTG-GCTTT 12724 Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 ||| ||| | |||||||| | || ||||||| || | ||| ||||| |||| || Sbjct 12723 CACATTCTCAATTGTATCACTAGGTTCAACTTCTAAGGTGATGGTTTTGCCAGTCAGGGT 12664 Query 64426 TTTTACGAAAATTTGCAT 64443 ||| || ||||||||||| Sbjct 12663 TTTAACAAAAATTTGCAT 12646 >seq87354 Length=3251 Score = 113 bits (124), Expect = 4e-20 Identities = 338/511 (66%), Gaps = 13/511 (3%) Strand=Plus/Minus Query 27659 TTTAAAGTGGCCATTCACGATCCGTGGGCTGCATTGCAAAAACCACAAAAAGGCGTTTCG 27718 ||| |||||| || ||||| || |||||||| | |||||| | | | ||| ||| Sbjct 1142 TTTGAAGTGGTGATCCACGACCCATGGGCTGCGATTCAAAAAGCGCTACCAGGTGTT--- 1086 Query 27719 GCTTGGACGGAAC-AATACAAAGGTAATTTTGGACAGTTAATGGCGATAAAGC-GTGCAA 27776 | | | | || | ||| | |||| | | |||||||||||| |||||| | || | Sbjct 1085 GATAGCAATGACCCAATTCGT-GGTACGTATTCGCAGTTAATGGCGTTAAAGCAGCGCTA 1027 Query 27777 ACCCGCATTTAAAAATTCTACCGTCCATAGGAGGGTGGACGCTGTCGGATCCATTTTACT 27836 || | || | |||||| |||| || | || || ||||| | || || ||| ||| || Sbjct 1026 TCCTG-ATCTGAAAATTTTACCATCGGTGGGTGGTTGGACTTTATCAGACCCA-TTTGCT 969 Query 27837 TTTTTCACGACGCT--GGCAAA-CGCGCCACATTCGTCGAATCGGTTCGCGAATTTCTGC 27893 | ||| || || | ||||| |||| ||| || || | ||| | || ||| | Sbjct 968 TATTTTAC--CGATAAAGCAAATCGCGACACGTTTGTGGCATCAATGGAAGAGTTTTTAA 911 Query 27894 AAACTTGGAAATTTTTCGACGGCGTGGACATCGATTGGGAATTTCCTGGCGGTAACGGCG 27953 ||| ||||| || | |||||| || || || || ||||||| ||||| ||| | || | Sbjct 910 GAACGTGGAAGTTCTACGACGGTGTAGATATTGACTGGGAATACCCTGGTGGTCAGGGTG 851 Query 27954 CAAACCCACTGTTAGGCGATCCCCAACGAGACGGTTTAGTGTATGTGGTGTTGTTGCGCG 28013 | || ||| |||||||| || ||||| | || || | ||| ||| | Sbjct 850 CTAATCCAAATTTAGGCGACCCAGTTGCTGACGGCCCTGCATACGTTGCGTTAATGCAAG 791 Query 28014 AACTTCGCGATATGCTCGATCAACTCGAACACCACACGGGCCGGCAATACGAACTGACAA 28073 | || || | ||||| ||| | || ||| | | || || || | || ||| | ||| Sbjct 790 AGCTGCGAGCGATGCTTGATAAGCTTGAAGCCGAGACAGGTCGTGAGTATGAATTAACAT 731 Query 28074 GTGCAATCGGCGCTGGCTACGACAAAATTGAGGTAGTTGATTACAACGAAGCGCAATCGT 28133 || || || || || |||||||||||||| | || || ||| |||| ||| | Sbjct 730 CAGCGATTGGTGCGGGTTACGACAAAATTGAAGATGTCGACTACTCACAAGCTCAACAAT 671 Query 28134 ATTTGGACAAAATCTTTTTAATGAGTTATGA 28164 || |||| | || || |||||||| ||||| Sbjct 670 ATATGGATTACATTTTCTTAATGAGCTATGA 640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498519125247840