Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_010495.1 Length=45051 Score E Sequences producing significant alignments: (Bits) Value seq34866 96.9 1e-15 >seq34866 Length=13211 Score = 96.9 bits (106), Expect = 1e-15 Identities = 161/230 (70%), Gaps = 7/230 (3%) Strand=Plus/Plus Query 32826 ACCGCCAAGCATCTGCATGACGCCACCCATTTGTGGAATGACAATCTCAGTGGTGTATTT 32885 |||||| | ||| ||||| || ||||| | | | || || || || |||||||| Sbjct 5611 ACCGCCTAACATTTGCATTTGACCGCCCATGTCT---ACCACGATTTCTGTAGTGTATTT 5667 Query 32886 GTCCACGCCGCTGCTG--TCAGTCCACTTACGAGTGCGAAGTTGTCCTTCTATATAAACC 32943 || ||| || | |||||||| ||||| || | | | ||||| || || || Sbjct 5668 TTCTTGGCC--TGATTGATCAGTCCATTTACGCGTTTGTAAACGACCTTCGATGTACACT 5725 Query 32944 TGCGACCCTTTACGAAGATACTCTCCTGCAACTTCCGCAATTTTTCCGAAGATAACAACT 33003 || || ||||||||||| || || || |||||||| || | ||| || || | || || Sbjct 5726 TGTGAACCTTTACGAAGGTATTCACCAGCAACTTCTGCTAGTTTGCCAAATAACACGACA 5785 Query 33004 CGATGCCATTCAGTATGTTCTTTCTTTTCTCCTGTTTGCTTGTCTTTCCA 33053 || |||||||||||| | |||| | ||| ||||| | || |||||||| Sbjct 5786 CGGTGCCATTCAGTACGCTCTTGCATTTGCCCTGTGTTTTTATCTTTCCA 5835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143733307403416