Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_010583.1 Length=111382 Score E Sequences producing significant alignments: (Bits) Value seq5 129 4e-25 seq96199 113 3e-20 >seq5 Length=869209 Score = 129 bits (142), Expect = 4e-25 Identities = 222/317 (70%), Gaps = 4/317 (1%) Strand=Plus/Minus Query 51046 ATGGGTATGCATACACGGACGTAGGCATCCTTTACGAAATTCCCCACGGGTTCCAAAAGT 51105 ||||||||||||||| || || || || || ||| || ||| ||||| ||||| Sbjct 100360 ATGGGTATGCATACAGGGCCGCAGACAACCAAGTTCAAACTCACCA-GGGTTATAAAAGG 100302 Query 51106 TAAA-ATTTCTCCACGATCGTCAATCCCTCTTTTCAAATTA-TGATAGACTTTGGCTAAC 51163 | | || || |||||||||| ||||| | ||| || ||| || ||| || | Sbjct 100301 TCAGGATCTCGGCACGATCGTCGATCCCCTTGCTCAGGTTGCTGAC-GATTTTTGCCAGT 100243 Query 51164 TGATCAAATACCATACCATCAGAATTAGTCCAATGACGTCCTTGAACACCATAGACTCGT 51223 ||||| || ||||| | || |||| | || ||||| |||||||| || || Sbjct 100242 TGATCTAAAGTTGAGCCATCGGGCTTCTGCCAACGCCGGCCTTGCACACCATATACCCGG 100183 Query 51224 CCCATATCATCCTCGCCTTTACGGAATGGATTACCTAGCCAGGCAATATTTTCATTTGCA 51283 ||||||||||| || || ||||| || ||| ||| |||||| |||||| || ||| Sbjct 100182 CCCATATCATCTTCACCCTTACGATGCGGGTTATCTAACCAGGCCTGATTTTCGTTGGCA 100123 Query 51284 TTAGCATTCCATGTATTAACACCAATAGCGCGGAATTGTGCTGCTGAGTCGTACCCACGG 51343 || |||||||| |||||| ||| ||||| ||||||||||| || ||| || || | Sbjct 100122 TTCGCATTCCAGGTATTACAACCGATAGCACGGAATTGTGCGGCACTGTCATAACCCCTT 100063 Query 51344 AGATATCCGATCATTTC 51360 | ||||| | || ||| Sbjct 100062 AAGTATCCTAACAATTC 100046 >seq96199 Length=2664 Score = 113 bits (124), Expect = 3e-20 Identities = 231/341 (68%), Gaps = 2/341 (1%) Strand=Plus/Minus Query 51012 TTAGGTATAGTGTATCACCTAAAATAGAGAATTGATGGGTATGCATACACGGACGTAGGC 51071 ||| ||||| ||||| || || | ||| || || || |||||||| || |||| | Sbjct 2287 TTAAGTATAAAGTATCGCCCAACAAAGAAAAGGTGTGCGTGTGCATACAAGGGCGTAAAC 2228 Query 51072 ATCCTTTACGAAATTCCCCACGGGTTCCAAAAGTTAAAATTTCTCCACGATCGTCAATCC 51131 | ||| |||||| || | | |||||| | ||||| || ||||| ||||| | Sbjct 2227 AACCTAGCTCAAATTCACCTGGATTATAAAAAGTGACGATTTCACCGCGATCATCAATTC 2168 Query 51132 CTCTTTTCAAATTAT-GATAGACTTTGGCTAACTGATCAAATACCATACCATCAGAATTA 51190 || | || |||| |||| ||||| | |||||||| ||||||||| Sbjct 2167 CTTTCGATAAGTTATCGATA-ACTTTTTTAAGCTGATCAAGGTGGCTACCATCAGGGCGT 2109 Query 51191 GTCCAATGACGTCCTTGAACACCATAGACTCGTCCCATATCATCCTCGCCTTTACGGAAT 51250 |||| || |||||||||||||| || || |||||||||||||| || |||| Sbjct 2108 TGCCAACTGCGCCCTTGAACACCATACACACGGCCCATATCATCCTCACCACTACGATGC 2049 Query 51251 GGATTACCTAGCCAGGCAATATTTTCATTTGCATTAGCATTCCATGTATTAACACCAATA 51310 ||||| | ||||| || | || || || || || |||||||| || || || ||| Sbjct 2048 GGATTTTCAAGCCACGCTTTGTTCTCGTTCGCGTTGGCATTCCAAGTCATACAGCCGATA 1989 Query 51311 GCGCGGAATTGTGCTGCTGAGTCGTACCCACGGAGATATCC 51351 | || || ||||| || |||||| ||||| | ||| || Sbjct 1988 TCACGAAACTGTGCAGCGCTGTCGTAACCACGTAAATAACC 1948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355514947339028