Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= NC_011019.1
Length=53572
Score E
Sequences producing significant alignments: (Bits) Value
seq140 89.7 2e-13
seq153562 82.4 3e-11
>seq140
Length=372893
Score = 89.7 bits (98), Expect = 2e-13
Identities = 76/94 (81%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 3253 CGCCGCGCTGGTCGACTCCGCGCCCGACACCCTGAACACGCTCAACGAGCTGGCCGCGGC 3312
||||||||||||| | ||||||| | | |||||||||||| | || ||||| || ||
Sbjct 156676 CGCCGCGCTGGTCAATGCCGCGCCGGGGGCGCTGAACACGCTCGATGAACTGGCGGCCGC 156617
Query 3313 GCTGGGCGATGACCCGAACTTCGCTACCACGGTC 3346
||| ||||| || ||||||||||| |||||| ||
Sbjct 156616 GCTTGGCGACGATCCGAACTTCGCCACCACGATC 156583
Score = 82.4 bits (90), Expect = 3e-11
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 3255 CCGCGCTGGTCGACTCCGCGCCCGACACCCTGAACACGCTCAACGAGCTGGCCGCGGCGC 3314
||||||||||| | ||||||||| | ||||| ||||| | || ||||| || ||||
Sbjct 157283 CCGCGCTGGTCAATGCCGCGCCCGGTGCGCTGAATACGCTTGATGAACTGGCGGCCGCGC 157224
Query 3315 TGGGCGATGACCCGAACTTCGCTACCACGGTCGTC 3349
| ||||| ||||||||||| || |||||| || ||
Sbjct 157223 TTGGCGACGACCCGAACTTTGCCACCACGATCCTC 157189
>seq153562
Length=1142
Score = 82.4 bits (90), Expect = 3e-11
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 3255 CCGCGCTGGTCGACTCCGCGCCCGACACCCTGAACACGCTCAACGAGCTGGCCGCGGCGC 3314
||||||||||| | ||||||||| | ||||| ||||| | || ||||| || ||||
Sbjct 473 CCGCGCTGGTCAATGCCGCGCCCGGTGCGCTGAATACGCTTGATGAACTGGCGGCCGCGC 532
Query 3315 TGGGCGATGACCCGAACTTCGCTACCACGGTCGTC 3349
| ||||| ||||||||||| || |||||| || ||
Sbjct 533 TTGGCGACGACCCGAACTTTGCCACCACGATCCTC 567
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 170942147347088
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |