Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_011040.1 Length=39816 Score E Sequences producing significant alignments: (Bits) Value seq34826 87.8 5e-13 >seq34826 Length=13225 Score = 87.8 bits (96), Expect = 5e-13 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 31872 GGCATTGAGAACAACTCATTCCTTGAAGCCCGTAACCTGTTCGATTCTGACATGCCTGTA 31931 ||| | ||||||||| | ||| ||||| |||||||| ||||| || || ||| | | Sbjct 5824 GGCCTGGAGAACAACGACTACCTCGAAGCTCGTAACCTCTTCGACTCCGATATGTCGATC 5765 Query 31932 ACGCTTCCTAACGGACAACAGTTCTCTGTGAATGACTTGCGTGACTTCGACATGAAACAC 31991 || ||| |||| || | |||| ||||||||||| | || |||||| || || | Sbjct 5764 ACCGCGCCTGACGGCCAGCCGTTCGCTGTGAATGACCTCCGAGACTTCAACCTGCTTCGG 5705 Query 31992 GTTATGCCAGCCTATGACCGCCGTGTTGATGGTGATATTGCTATCATGGGTGGTACAGGG 32051 || | || || |||||| | || | ||||| || || |||||||||| || ||| Sbjct 5704 GTGGTCCCGCAGTACGACCGCAGGGTCAACGGTGACATCGCCCTCATGGGTGGCACCGGG 5645 Query 32052 AAG 32054 ||| Sbjct 5644 AAG 5642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127017161750896