Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_011043.1 Length=41181 Score E Sequences producing significant alignments: (Bits) Value seq34826 116 1e-21 >seq34826 Length=13225 Score = 116 bits (128), Expect = 1e-21 Identities = 275/412 (67%), Gaps = 14/412 (3%) Strand=Plus/Minus Query 9464 TAGACCTCATCGTTAAGACCCATGAGGAAAACTACGCC--GCTCGT--CTGGAAGCGCAC 9519 |||||| |||||| || | ||| |||| ||||||| || ||| ||| || || Sbjct 8748 TAGACCGCATCGTGAAAATCCACGAGGCCGACTACGCGAAGCGCGTGACTG--AGTTCAA 8691 Query 9520 GAAGCGAACCCGCCTAAGGTTCAGAAGGGTAAGAAACCTCTGAAGCCGTATGAAGGCGAC 9579 |||| ||||| || || | | | | ||| || || |||||||| |||||||| Sbjct 8690 GAAG--AACCCTCCGCAGACGCCAAGTGCCAGGAAGCCACTCCAGCCGTATCAAGGCGAC 8633 Query 9580 ATGCCGTTCTTCGATAACGGTGACGGCACCACCACGTTCAACTTCAAGTGCTACGGTTCG 9639 |||| ||| |||| |||||||||||||| | | | |||||||| | ||| | | Sbjct 8632 CTGCCCTTCATCGACAACGGTGACGGCAC------GGTGACCTTCAAGTTCGTCGGCTGG 8579 Query 9640 TACGAGGACAAGAAGACTGGCGAGACCAAGAAGATTGTTCTGGGCGTAGTAGACGCGAAG 9699 | || ||||| ||||||| | ||| ||| | || || ||||| ||| Sbjct 8578 GCCAGCTACGAGAAGGACGGCGAGATGATCCCGATCCCCCTGCGTGTCGTTGACGCCAAG 8519 Query 9700 GGCAAGCGCATTCAGGACGTTCCGATTATCGGTGGCGGCTCCAAAGTGAAGATTCGCTTC 9759 |||||| ||| || || |||| ||| || |||||| | | ||| | |||||| Sbjct 8518 GGCAAGGCCATCGCTGATGTCCCGAACATCTCGGGTGGCTCCGAGGGCAAGGTCCGCTTC 8459 Query 9760 TCGCTGGTACCGTACGGCTGGTCTGCGGTAGCTGGCGCTTCCGTTAAGTTGCAGCTGGAA 9819 || | || || ||||||||| || | ||||| ||||| ||| | || |||||| Sbjct 8458 TCCATCGTCCCCTACGGCTGGAACCCGACCGTGGGCGCCTCCGTGAAGCTCCAACTGGAA 8399 Query 9820 GGCGTGATGCTGGTCGAACTGGCTACCTTTGGTGGTGGCGAAGACGACTGGG 9871 ||| | |||||| | |||||| | | || ||| |||||||||||| Sbjct 8398 GGCTTCATGCTGACCAAACTGGTCGAGTCAGATGATGGTCAAGACGACTGGG 8347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131375812909576