Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq4 347 6e-91 seq14 174 8e-39 seq61069 86.0 3e-12 >seq4 Length=924746 Score = 347 bits (384), Expect = 6e-91 Identities = 590/850 (69%), Gaps = 9/850 (1%) Strand=Plus/Plus Query 65911 CCATTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGG 65970 ||||| |||| |||||| | | |||||| ||| || |||||||| || || | || Sbjct 25959 CCATTTCCACAGGCTCGCTGGGGCTGGACATCGCCCTGGGCATCGGCGGCCTGCCCAAGG 26018 Query 65971 GCCGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACG 66030 |||| | || ||||||||||| || ||||| || || ||| | ||| || ||| || | Sbjct 26019 GCCGCATCGTCGAGATCTACGGCCCCGAGTCCTCGGGCAAGACCACGCTGACCCTGCAGG 26078 Query 66031 CGGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTC 66090 | ||| |||| |||||||||| ||||||| | |||||||||| ||| | | Sbjct 26079 TCATCGCCGCCTGCCAGCGCGCCGGTGGCACGGCCGCCTTCGTCGACGCCGAGCATGCGC 26138 Query 66091 TCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGC 66150 | || || ||||||| |||||| || ||||||| | || |||| ||||| Sbjct 26139 TGGATCCGCTCTACGCCGGCAAGCTCGGCGTCAATGTCGAGGACCTGCTGGTGTCGCAGC 26198 Query 66151 CAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTT 66210 | ||||| ||||||||||| ||||| ||| ||| | || || || |||| ||| Sbjct 26199 CGGACACCGGCGAGCAGGCGCTGGAAATCACCGACATGCTGGTGCGCTCGGGCGCGGTCG 26258 Query 66211 CCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACA 66270 |||||||||||| ||||| || || || || |||||| || || |||| || || | Sbjct 26259 ACATCATCGTTGTCGACTCCGTCGCCGCGCTCACGCCGCGCGCCGAAATCGAGGGTGAAA 26318 Query 66271 TCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGA 66330 | || ||| |||||||||||| || || ||||| ||||| ||||| |||||||| | | Sbjct 26319 TGGGCGACATGCACGTCGGCCTCCAGGCTCGCCTCATGTCGCAGGCGCTGCGCAAGATCA 26378 Query 66331 CCGGCACGATTGCCAGC--ACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAA 66388 |||||| || | ||| ||||| || | | | | || ||| | ||| ||| Sbjct 26379 CCGGCAACAT--CAAGCGTTCCAACTGCCTGGTCATCTTCATCAACCAGATCCGCATGAA 26436 Query 66389 GATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTT 66448 ||||||| | || | | |||| || ||||||||||| || || || || || Sbjct 26437 GATCGGCGTCATGTTCGGCAACCCG---GAAACCACCACCGGCGGCAACGCGCTCAAGTT 26493 Query 66449 CTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGC 66508 ||||||||||||||| | || |||| | |||| | | | ||||||||||| || | Sbjct 26494 CTACGCCTCGGTGCGCCTCGACATCCGACGCATCGGCGCGGTCAAGGAAGGCGAAGAAGT 26553 Query 66509 TGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCA 66568 ||||| || ||||| ||||| |||||||||||| || |||| ||| | | | Sbjct 26554 GGTCGGTTCGGAAACCCGCGTCAAGGTGGTCAAGAACAAGGTGTCGCCGCCGTTCAGGGA 26613 Query 66569 GGCTGAGTTTTCCATCGTCTACGGCGAGGGCATTTCCCGCGAGGCTGAACTCCTCGACAT 66628 ||| ||||| ||| |||||||| ||||||| |||| ||| || || ||||| | Sbjct 26614 GGCCGAGTTCCAGATCCTCTACGGCCAGGGCATCAACCGCCAGGGCGAGATCGTCGACCT 26673 Query 66629 GGCCGTTTCCCGAGGGCTCATCAAGAAGTCTGGGGCCTGGTTCAAGTACGGGGACAAGAA 66688 || ||| | || || || | ||||| || ||||||| | ||| || ||| || Sbjct 26674 GGGCGTGAAGCTCGGTCTGGTCGACAAGTCCGGCGCCTGGTACGCCTACCAGGGCAACAA 26733 Query 66689 CATCGGCCAGGGCAAGCCCAAGACCGTGC-AGTGGCTGAAGGACAACCCGGACGTCGCCG 66747 ||||| ||||||||| ||| || ||| ||| ||| ||| |||||||| | || Sbjct 26734 GATCGGGCAGGGCAAGGGCAATGCC-TGCAAGTTCCTGCTGGAGAACCCGGATATTGCGC 26792 Query 66748 CCTCCATCGA 66757 | ||||||| Sbjct 26793 GCACCATCGA 26802 >seq14 Length=669857 Score = 174 bits (192), Expect = 8e-39 Identities = 458/693 (66%), Gaps = 17/693 (2%) Strand=Plus/Plus Query 65919 ACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGCCGGGTA 65978 || |||||| | | || ||| ||| || || ||||| || | |||| |||||| | Sbjct 599849 ACAGGCTCGCTTGGCCTCGACATCGCGCTGGGGATCGGCGGATTGCCGAAGGGCCGCATC 599908 Query 65979 GTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCGGTGGCC 66038 || || |||||||| || || || || ||| | ||| || || || | ||||||| Sbjct 599909 GTCGAAATCTACGGGCCGGAAAGCTCCGGTAAGACCACGCTGACGCTGCATGTGGTGGCC 599968 Query 66039 AATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTCGACCCT 66098 | | ||||| ||||| | ||||| | | || ||||||||| | || ||||| Sbjct 599969 GAAGAGCAGAAAAAGGGTGGTGTCTGCGCCTTCGTAGATGCCGAACATGCGCTGGACCCG 600028 Query 66099 GAGTACGCCGCGGC-GCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCAGACAC 66157 || || ||| ||| || || | | || | || || | ||||| ||||| Sbjct 600029 ATCTATGC-GCGTAAGCTGGGTGTCAACCTTGATGAACTGCTGATCAGCCAGCCCGACAC 600087 Query 66158 TGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCATCAT 66217 |||||| ||||| || || |||||||| || || || || | || | || | Sbjct 600088 TGGCGAACAGGCGCTTGAAATCGTTGATACGCTGGTGCGTTCGGGTGCCGTGAGCCTCGT 600147 Query 66218 CGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGGA 66277 || || ||||| || || || ||| ||| | ||| ||||||| ||||| || || Sbjct 600148 GGTGGTCGACTCGGTCGCTGCGCTGACCCCGAAATCCGAGATCGAAGGCGACATGGGCGA 600207 Query 66278 CTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCGGCAC 66337 | | |||||| || ||||| |||||| |||||||||||||||||||| | | | Sbjct 600208 CGCTACTGTCGGCGCCCAGGCCCGACTGATGAGCCAGGCCATGCGCAAGCTGACGGCCTC 600267 Query 66338 GATTGCCAGCACCAA---CACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATCGG 66394 ||| | | || | || || | ||| | | | || ||| | || ||||||||| Sbjct 600268 GATCGGCCGCTCGAATTGCATGGTCATCTTCA---TCAACCAGATCCGGATGAAGATCGG 600324 Query 66395 CAACGTG---GGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTA 66451 | || ||| || |||||| |||||||||||||| | || ||| ||||| Sbjct 600325 CGTGATGTTTGGCAAC--CCCGAA----ACCACCACCGGTGGCCATGCGCTGAAATTCTA 600378 Query 66452 CGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGCTGT 66511 ||| || ||| |||| | || | |||| | || ||||| |||| |||| || Sbjct 600379 TGCCAGCGTCCGTCTGGACATTCGTCGCATCGGCTCCATCAAGGATCGCGACGAGGTGGT 600438 Query 66512 CGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGGC 66571 |||||| || ||||||||||| || ||||||||| |||| || ||| | |||| Sbjct 600439 TGGCAACTCGACCCGCGTGAAGGTCGTGAAGAACAAGGTGGCCCCGCCGTTCAAACAGGT 600498 Query 66572 TGAGTTTTCCATCGTCTACGGCGAGGGCATTTC 66604 || || ||| | || ||||||||||| || Sbjct 600499 CGAATTCGATATCATGTATGGCGAGGGCATCTC 600531 >seq61069 Length=5775 Score = 86.0 bits (94), Expect = 3e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 66417 GAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGC 66476 || ||||||||||| ||||| || || |||||| |||| |||||| |||| ||||| Sbjct 2924 GAAACCACCACCGGCGGTAACGCCCTCAAGTTCTACTCCTCCGTGCGTCTGGACATCCGC 2983 Query 66477 AGGATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACGCGCGTGAAGGTT 66536 | | || | | | ||| || ||||| |||| || |||| | || ||||| |||||| Sbjct 2984 CGTACCGGCGCGGTGAAAGAGGGCGACGAGGTGGTTGGCAGCGAGACCCGCGTCAAGGTT 3043 Query 66537 GTCAAGAACAAG 66548 || || |||||| Sbjct 3044 GTGAAAAACAAG 3055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 241937783154512