Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_011216.1 Length=37635 Score E Sequences producing significant alignments: (Bits) Value seq4 96.9 8e-16 >seq4 Length=924746 Score = 96.9 bits (106), Expect = 8e-16 Identities = 199/285 (70%), Gaps = 17/285 (6%) Strand=Plus/Minus Query 15461 TGAACAAGTCGCAACTCATCGACGCCGTGGCGAAGAACGCCGAGCTGACGAAGGCCCAGG 15520 |||||||||| |||| ||||||||| | || | |||| | ||||| |||||| | | Sbjct 708652 TGAACAAGTCTGAACTGATCGACGCCATCGCCGACGCCGCCAACCTGACCAAGGCCGATG 708593 Query 15521 CGGCTCAATCCGTCGAAGC--CG--TGCTGAACGCGATCCAGCTCGGCCTGCAGGAAGAC 15576 | | | | | || || || ||||| || || | || || |||| ||| | Sbjct 708592 CCGGCCGTGCTCTGGACGCGACGGTTGCTGC-CGTGACC--GC-CGCCCTGAAGGCTGGT 708537 Query 15577 GGCGACGTGGCGCT-GTCGGGCTTCGGCACCTTTGCCGTG--GCAGCGCGCAAAGCACGC 15633 | || || | || ||||| |||||||||||| ||||| | ||||||| || ||| Sbjct 708536 GACGCAGTCACCCTCGTCGG-CTTCGGCACCTTCGCCGTCAAGGAGCGCGCC--GCCCGC 708480 Query 15634 ACCGGCCGCAATCCGGCGACGGGCGAATCGATCCAGATCGCCGCCAGCAAGGCCGTGAAA 15693 ||||||||||| ||| ||| ||| | ||| ||||||||||| ||| || | Sbjct 708479 ACCGGCCGCAACCCGCAGACCGGCAAGGAAATCAAGATCGCCGCCTCGAAGACCCCGTCC 708420 Query 15694 TTCAAGCCCGGCAAGGCACTGAAAGACGCCGTGAA---CTGATGC 15735 |||||| ||||||||| ||||| |||||||| || ||||||| Sbjct 708419 TTCAAGGCCGGCAAGGGTCTGAAGGACGCCGTCAACGGCTGATGC 708375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120052899350104