Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= NC_011273.1
Length=164602
Score E
Sequences producing significant alignments: (Bits) Value
seq5165 98.7 1e-15
seq363 98.7 1e-15
seq24579 91.5 2e-13
>seq5165
Length=98167
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674
||||| | |||||||||||||||||| ||||||||||||||| ||| ||| |||||||||
Sbjct 18611 GCGGGATGGAGCAGCTCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTCAAAT 18552
Query 92675 CCCACTCCCGCCAC 92688
|| |||||||| ||
Sbjct 18551 CCTACTCCCGCAAC 18538
>seq363
Length=289854
Score = 98.7 bits (108), Expect = 1e-15
Identities = 110/143 (77%), Gaps = 3/143 (2%)
Strand=Plus/Minus
Query 110965 CTGGTGCCAAGCCCAA-GCCGTGCATCTGCGGCCCTGGCCGTGGCTCCGGCGGCGGCTCG 111023
|||| |||||| ||| | ||||| || |||| || || || ||||||| |||||||
Sbjct 188654 CTGG-GCCAAGAACAACGGCGTGCCGGTGGGGCCG-GGTCGCGGTTCCGGCGCCGGCTCG 188597
Query 111024 CTGGTGAACTACCTGCTGGGCATCACCTCGCTCGACCCGATCAAGTACGACCTGTCGTTC 111083
|||||| ||| |||| ||||||| || || |||||||||||||||||| ||||
Sbjct 188596 CTGGTGGCTTACTCGCTGTTCATCACCGACCTGGATCCGATCAAGTACGACCTGCTGTTC 188537
Query 111084 GAGCGGTTCATCAACCCCGACCG 111106
||||| ||| |||| ||||| ||
Sbjct 188536 GAGCGCTTCCTCAATCCCGAGCG 188514
>seq24579
Length=20444
Score = 91.5 bits (100), Expect = 2e-13
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 136001 CTTCGACGAGAACGTCGGCGTGGCGCGGGCGAAGAACAAGTGCATCGAGCTGCTCATGGA 136060
|||||| ||||||||||| | || |||||| ||||| ||| | || |||| |||||
Sbjct 14155 CTTCGAGAAGAACGTCGGCATAGCCGCGGCGAAAAACAAATGCTTTGAATTGCTGATGGA 14096
Query 136061 CGCGGGCTGCGAGCACCTGTTCCTGTTCGACGATGATTGCTGGCCCAA 136108
||| ||| ||||| |||||||||||||||||||||||||| ||
Sbjct 14095 TATCGGCGTCGATCACCTTTTCCTGTTCGACGATGATTGCTGGCCTAA 14048
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 525412000134720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |