Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_011287.1 Length=58554 Score E Sequences producing significant alignments: (Bits) Value seq161127 80.6 1e-10 >seq161127 Length=1096 Score = 80.6 bits (88), Expect = 1e-10 Identities = 107/146 (73%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 42142 ACTACGGAGGCCGCGGGATTACAGTCTGCGAACGGTGGCGGTCCTTCCCAAACTTCCTCG 42201 ||||||| ||| | || || || |||||||| || ||| ||| ||| ||||||||| | Sbjct 772 ACTACGGCGGCAGAGGTATCACCGTCTGCGATCGCTGGATGTCATTCGAAAACTTCCTTG 831 Query 42202 CAGACATGGGACACCCACCAGACGGACAC-ACCATCGATCGAATCGACAACGACGGCAAC 42260 | |||||||| | | || |||| | || | ||||||||||| |||| ||| Sbjct 832 CCGACATGGGCGAATGTC-AGCCGGATATGACGCTTGATCGAATCGATCCTAACGGAAAC 890 Query 42261 TACGAACCGGGCAACTGCCGGTGGGC 42286 |||||||| | ||| || |||||||| Sbjct 891 TACGAACCCGACAATTGTCGGTGGGC 916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 186850425788512