Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2234 105 7e-18 >seq2234 Length=154088 Score = 105 bits (116), Expect = 7e-18 Identities = 164/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | || ||||||||||| | || || ||||| |||||||| || Sbjct 11648 CCTCCTCTCAACCTCAGAACTAAATGTAATGTAGATTCTTTTTGGATGTTGTAATCAGAA 11589 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || | || ||||| | | | ||||| | |||||| || || || Sbjct 11588 AGAGTACGACCATCTTCCAACTGCTTACCAGCAAAAATTAGCCTCTGTTGATCTGGGGGG 11529 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||||||||| ||| |||| | ||| | | ||| | ||||| | | ||| || Sbjct 11528 ATACCTTCTTTGTC-TTGAATTTTGGCTTTGACGTTTTCTATTGTGTCACTAGGCTCTAC 11470 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 || | || | ||||| ||||| || ||||| || ||||| |||||| || Sbjct 11469 TTCCAAGGTGATGGTTTTGCCAGTTAGGGTTTTCACGAAAATTTGCATGCCT 11418 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 ||||| | ||| | | || || ||||||||||| || || || |||||| || Sbjct 12089 AAAACCAGATGCAGAGTAGATTCTTTTTGAATGTTATAATCCGACAGAGTACGGCCATCT 12030 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || ||||| ||||| | | | |||| |||||| || || || || || ||||||||||| Sbjct 12029 TCTAGTTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGGGGAATTCCTTCTTTGTCC 11970 Query 138523 GTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTT 138582 ||||||| ||| | | ||| | ||| || | | || || || | || | ||| Sbjct 11969 TGGATTTTTGCTTTAACATTTTCAATGGTATCACTTGGTTCGACTTCTAATGTAATTGTT 11910 Query 138583 TTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 ||||| || ||||| ||||||||||| |||||| || Sbjct 11909 TTACCTGTTAGAGTCTTTACAAAAATTTGCATGCCT 11874 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 ||| |||| ||||| | || || || |||||||||||||| | |||||| || Sbjct 11406 CAAGACTAGATGTAGAGTAGATTCTTTCTGAATGTTGTAGTCCGATAGAGTACGGCCATC 11347 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 || ||||| ||||| | | | || | |||||||||||| || || ||||||||||| || Sbjct 11346 TTCTAGTTGCTTACCAGCAAAAATCAAACGCTGTTGGTCTGGGGGAATACCTTCTTTATC 11287 Query 138522 GGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581 ||||||| || | | ||| | |||||| | | || || | || | || Sbjct 11286 TTGGATTTTTGTCTTGACATTTTCTATTGTGTCGCTAGGTTCACTTTCTAAGGTTATGGT 11227 Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || |||| |||||| ||||| || ||||| Sbjct 11226 CTTCCCTGTCAAAGTTTTGACAAATATTTGCAT 11194 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 ||| || || || | | |||| |||||||| ||||||||||| || |||||| || Sbjct 11862 CAAGACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAGTCCGACAGAGTACGTCCATC 11803 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 || || || || || | | |||||| || ||||| || ||||| |||||||| || || Sbjct 11802 TTCTAGCTGCTTGCCCGCAAAGATTAATCGTTGTTGATCAGGAGGGATACCTTCCTTATC 11743 Query 138522 GGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| |||| | ||| | | ||| | || || | | ||| || || | || | | Sbjct 11742 -TTGAATTTTAGCTTTGACATTTTCAATTGTATCACTTGGCTCAACTTCTAGTGTAATTG 11684 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || ||||| |||||||| || || || ||||| Sbjct 11683 TCTTCCCAGTAAGAGTTTTGACGAAGATTTGCAT 11650 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||||| ||| | | || |||||||||||||||||||| | || | || || Sbjct 10719 AACTAGATGAAGTGTGGATTCCTTTTGAATGTTGTAGTCCGAGAGGGTTCTTCCATCTTC 10660 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 | |||||| || | | |||| | || ||||| || ||||| || ||||||||||| | Sbjct 10659 CAATTGTTTTCCAGCAAAGATCAATCGTTGTTGATCTGGAGGAATTCCTTCTTTGTCC-T 10601 Query 138525 GATTTTTTGT-TTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTT 138583 || | || | |||| | ||| | ||| || | | ||| ||||| | || | || | Sbjct 10600 GAATCTTGGCCTTTACATTTTCAATGGTATCACTAGGCTCAACCTCTAGAGTGATGGTCT 10541 Query 138584 TACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || || |||||||| |||||||||||||| Sbjct 10540 TGCCGGTGAGAGTTTTCACAAAAATCTGCAT 10510 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/233 (69%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| |||| ||| | | ||| || |||| | || ||||| || || || || || Sbjct 12873 GCCTCCTCTCAACCTGAGAACCAAGTGTAGAGTAGATTCCTTCTGGATATTATAATCTGA 12814 Query 138447 CATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 || ||| | || | || || ||||||||||| | | |||||| | ||| || || || | Sbjct 12813 CAAAGTTCTGCCA-TCTTCAAGTTGTTTACCAGCAAAGATTAACCTCTGCTGATCTGGGG 12755 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 | ||||||||||| || |||||| ||| | | || | || || | | || | Sbjct 12754 GAATACCTTCTTTATCCTGGATTTTGGCTTTCACATTCTCAATTGTATCACTAGGTTCAA 12695 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 | || | || | ||||| |||||||| ||||| |||||||| |||||| || Sbjct 12694 CTTCTAAGGTGATGGTTTTGCCAGTCAGGGTTTTAACAAAAATTTGCATGCCT 12642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495144345625920