Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_011534.1 Length=39472 Score E Sequences producing significant alignments: (Bits) Value seq34826 84.2 6e-12 >seq34826 Length=13225 Score = 84.2 bits (92), Expect = 6e-12 Identities = 127/178 (71%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 31450 GAGAACAACTCATTCCTTGAAGCCCGTAACCTATTCGATTCTGACGTGCCAATCACTCTA 31509 ||||||||| | ||| ||||| |||||||| ||||| || || || | ||||| Sbjct 5818 GAGAACAACGACTACCTCGAAGCTCGTAACCTCTTCGACTCCGATATGTCGATCACCGCG 5759 Query 31510 CCGAATGGGCAACAGTTCTCTGTGAATGACCTTCGTGACTTCGATATGAAGCATGTGATG 31569 || | || || | |||| ||||||||||||| || |||||| | || | ||| | Sbjct 5758 CCTGACGGCCAGCCGTTCGCTGTGAATGACCTCCGAGACTTCAACCTGCTTCGGGTGGT- 5700 Query 31570 CCAGCA-TATGACCGCCGTGTTGATGGTGATATTGCTATCATGGGAGGCACAGGCAAG 31626 || ||| || |||||| | || | ||||| || || ||||||| ||||| || ||| Sbjct 5699 CCCGCAGTACGACCGCAGGGTCAACGGTGACATCGCCCTCATGGGTGGCACCGGGAAG 5642 Score = 84.2 bits (92), Expect = 6e-12 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 29320 ACCGGGCCACGAGGTGTCATGCAGTTCACTAAGGCAACTGGTCAGGCTTATGGCCTACAG 29379 || ||||| || ||| || ||||||||| ||||| ||||| | || || ||||| Sbjct 8008 ACGGGGCCTCGCGGTATCGGGCAGTTCACCAAGGCCACTGGGAAAGCCTACGGCCTGATC 7949 Query 29380 TCTGATGAGGACTTCAGCGACCCGGCTAAGTCTATTGACGCTGGCGCTCGCTACCTTGCA 29439 | || ||||||||| |||||| || ||||| || ||||| | |||||| || | Sbjct 7948 ACCGAGGAGGACTTCTTCGACCCCGCCAAGTCCATCGACGCAGCCGCTCGGCACATGCGC 7889 Query 29440 GACCTCGTTAAGAAGTACAATGGTGACGAACTCAAAGCTGCCCTAGCGTACAACCAAGG 29498 ||| | | ||| || ||| || ||||| || || || ||| |||||||||||| Sbjct 7888 GACAACCTCAAGGCGTCCAACGGCGACGAGCTGAAGGCGCTCCTGATGTACAACCAAGG 7830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125918717795888