Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_011613.1 Length=36632 Score E Sequences producing significant alignments: (Bits) Value seq11269 161 2e-35 >seq11269 Length=54388 Score = 161 bits (178), Expect = 2e-35 Identities = 160/202 (79%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 18261 ATGAAGCCTGACGCCTCCAACCACAATCCAGACCCGCGCTACCTGCGCGGGCTGCTCAAG 18320 ||||||||||||||||||||||||||||||||||||| |||||||||||||||| || | Sbjct 10032 ATGAAGCCTGACGCCTCCAACCACAATCCAGACCCGCACTACCTGCGCGGGCTGGTCGAC 9973 Query 18321 AAAGCCGGCATCAGCCAGCGGCGCGCAGCCGAGCTGCTCGGCCT-CAGTGACAGGGTTAT 18379 ||||| || |||||||||| | ||||||||| |||||||||| ||| | || | | Sbjct 9972 AAAGCAGGTGTCAGCCAGCGTCAGGCAGCCGAGTTGCTCGGCCTGTCGTGGCCTGGCT-T 9914 Query 18380 GCGCTATTACCTGAGCGAGGACGTCA-AGGAGGGCTACCGTCCCGCGCCGTATACCGTCC 18438 ||| | |||||| |||| || |||| | || ||| || |||| || ||||| || | Sbjct 9913 CCGCAACTACCTGCGCGACGA-GTCACACCAGCTCTATCGAGCCGCACCCTATACAGTTC 9855 Query 18439 AGTTCGCCCTGGAGTGCCTGGC 18460 | ||| | || || |||||||| Sbjct 9854 AATTCTCTCTTGAATGCCTGGC 9833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116850168865008