Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_012740.1 Length=166418 Score E Sequences producing significant alignments: (Bits) Value seq5 123 3e-23 >seq5 Length=869209 Score = 123 bits (136), Expect = 3e-23 Identities = 282/419 (67%), Gaps = 4/419 (1%) Strand=Plus/Minus Query 139678 CATCAGGTTATTAATCTGTACGCCGTAATCAAGATGACGAATGCGGTTATCTTCCACCCC 139737 ||||||| |||| ||| ||||| || || ||||| | | ||||| ||||| || || Sbjct 711172 CATCAGGCGGTTAAACTGCACGCCATAGTCCAGATGCCTTACCCGGTTCTCTTCTACACC 711113 Query 139738 CTTATTGTTCTTTAACACAATCAGACTTTCAAACTCTAAATGCCATATTGGGTAATAGAG 139797 || || || | || | ||| ||| | || | |||||| | ||||| | || Sbjct 711112 GCGGTTATTTTTCAGTACCAGCAGCGATTCCACTTCCAGATGCCACAAGGGGTAGAACAG 711053 Query 139798 AGTCGCCGCCCCGCCACGAATGCCGCCTTGTGAGCATGACTTAACGGCCGTCTGAAAATG 139857 || || || || ||||| | |||||||| ||||| || || || ||||| ||||| Sbjct 711052 GGTGGCGGCACCACCACGCACACCGCCTTGCGAGCAGCTTTTTACTGCGGTCTGGAAATG 710993 Query 139858 TTTCCAGAATGGGATAACGCCAGTATGACGAACTTCACCATGCCCGATCTTAGAT-CCTT 139916 || | || |||||| |||||||||| |||| |||| | ||| | | | ||| Sbjct 710992 CTTATAAAACGGGATACAGCCAGTATGAAAGGCTTCGCCATTACGGAT-TGGGCTACCTA 710934 Query 139917 CCGCGCGAATCATGCCAGCGTTGATACCGATACCAGCACGCTTGCTA-ATATACTTGATG 139975 |||||||| ||| ||||| ||||| ||||| || |||| || | | || || | Sbjct 710933 AAGCGCGAATACGGCCTGCGTTAATACCAATACCTGCGCGCT-GCGACACGTATTTTACA 710875 Query 139976 ATTGCATTTGCTGTTTCGTTGATGCCCTGCAATGAGTCATCACTTTCGATCACCACACAC 140035 || ||| | | || | ||||| | || |||| ||| || |||| || || Sbjct 710874 ATGGCACTGGAGGTGGCATTGATCGAATCCAGGCTGTCACCACACTCAATCAGTACGCAG 710815 Query 140036 GAACTAAATTGGCGTGTTGGGGTACGCACACCTGCCATAATCGGAGTAGGTAGAGAGAT 140094 || || || || || |||||||||||||| || | |||||| || || || || || || Sbjct 710814 GAGCTGAACTGACGGGTTGGGGTACGCACGCCCGACATAATAGGTGTCGGCAGTGAAAT 710756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531210107791680