Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_012741.1 Length=171451 Score E Sequences producing significant alignments: (Bits) Value seq5 141 1e-28 >seq5 Length=869209 Score = 141 bits (156), Expect = 1e-28 Identities = 340/512 (66%), Gaps = 3/512 (1%) Strand=Plus/Minus Query 142899 TTCTTGGTCTTCAAAATAAGAATAATAAAGCTCGCCACCCATTTCATGAGGACTAAACAG 142958 ||| || |||||||| | | || ||| ||| | | | ||| || || || |||| Sbjct 711262 TTCCTGATCTTCAAAGAAGGCATCATACAGCCC-CGGCACAT--CAGAGGGGCTGAACAA 711206 Query 142959 GGTAATATAATCATTCTTACCGAAACGTTCCATCATCAGGTCGTTTAACTGGATTCCGTA 143018 ||| ||||| |||| ||| | || | ||||||| ||| ||||| | || || Sbjct 711205 GGTGATATAGTCATCTTTAATCAGGCGCTGATACATCAGGCGGTTAAACTGCACGCCATA 711146 Query 143019 GTCCATATGACGAATACGGTTTTCATCGACACCTTTGTTGTTTTTCAGAACGAGCAGATT 143078 ||||| ||| | | ||||| || || ||||| ||| |||||||| || ||||| Sbjct 711145 GTCCAGATGCCTTACCCGGTTCTCTTCTACACCGCGGTTATTTTTCAGTACCAGCAGCGA 711086 Query 143079 TTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCACGGATTCCACC 143138 ||| ||||||| |||||| | || || | || || || || ||||| | || || Sbjct 711085 TTCCACTTCCAGATGCCACAAGGGGTAGAACAGGGTGGCGGCACCACCACGCACACCGCC 711026 Query 143139 TTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAATGGAATAACACCAGTATG 143198 ||| || || ||| || || ||||||||||| || | || || ||| |||||||| Sbjct 711025 TTGCGAGCAGCTTTTTACTGCGGTCTGGAAATGCTTATAAAACGGGATACAGCCAGTATG 710966 Query 143199 TTTGACTTCACCCATGCCAATACGAGAACCTTCAGCACGAATCATACCAACGTTAATACC 143258 | |||| || | | || | |||| ||| ||||| || |||||||||| Sbjct 710965 AAAGGCTTCGCCATTACGGATTGGGCTACCTAAAGCGCGAATACGGCCTGCGTTAATACC 710906 Query 143259 AATACCTGCACGTTTAGAAATGTATTCAATTATTGAGTTTGCAGTTTTGTTAATAGATTT 143318 ||||||||| || | || | ||||| | || | | | || || || || | Sbjct 710905 AATACCTGCGCGCTGCGACACGTATTTTACAATGGCACTGGAGGTGGCATTGATCGAATC 710846 Query 143319 CAGTGAGTCACCTGCTTCAATAACAACACAAGAACTAAATTGACGGGTTGGAGTACGTGC 143378 ||| |||||| ||||| | || || || || || ||||||||||| ||||| | Sbjct 710845 CAGGCTGTCACCACACTCAATCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTACGCAC 710786 Query 143379 ACCAGCCATAATAGGAGTAGGCAACGAAACCT 143410 || | ||||||||| || |||| |||| || Sbjct 710785 GCCCGACATAATAGGTGTCGGCAGTGAAATCT 710754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547279422680160