Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq26 212 2e-50 seq7 147 6e-31 seq40996 129 1e-25 seq100 125 2e-24 seq32195 122 2e-23 >seq26 Length=549101 Score = 212 bits (234), Expect = 2e-50 Identities = 478/701 (68%), Gaps = 23/701 (3%) Strand=Plus/Minus Query 8434 GGTGAGTTGATTATCGTCGGCGGACGGCCGTCGATGGGAAAGACCTCCCTCGCAATGAAT 8493 ||||| || | ||||||| | || ||||| ||||| |||||| || |||| ||||| Sbjct 110518 GGTGACCTGGTGATCGTCGCGGCGCGTCCGTCCATGGGCAAGACCACCTTCGCCATGAAC 110459 Query 8494 ATCGCAGAGCATGTCGCCATCGTG---TCGAGATTGCCCGTCGGCG-TCTTGTCGCTGGA 8549 | | ||| | |||||| || ||| | |||| | || | | || || |||| Sbjct 110458 CTGGTCGAGAA---CGCCATGCTGCGCTCGGGCCTGCC-GACGCTGGTGTTCTCCATGGA 110403 Query 8550 AATGCCGACCGAACAGTTGACCATGCGCATGCTGGCGTCGACATCCCGTATCAGCCAAAA 8609 ||||||| |||| ||| | |||||| |||||| ||||| ||| ||| || | Sbjct 110402 AATGCCGGCCGAGCAGATCGTCATGCGTATGCTGTCGTCGCTCGGCCGCATCGATCAGAC 110343 Query 8610 CAGGCTGCGAACCGGTCGCCTCGAGGATGACGACTGGCCGCGCCTGACGCGTGGCGTCGA 8669 | |||| | || || ||||| || ||||||||||||||||| | | | || Sbjct 110342 GCGCGTGCGCTCGGGCAAGCTGGAGGAGGATGACTGGCCGCGCCTGAC-CTCGACCATGA 110284 Query 8670 -GCTGATGGCCGACGCGCCCGTGCATATTCTCGATAGCTCCG-CGATCACCCCGT-CGAA 8726 |||| | ||||| | ||| | ||| | | ||| || | | |||| ||| Sbjct 110283 CGCTGCTCGCCGAACAGAAGCTGCTGGTCGACGACA-CGCCGTCGCTGAGCCCGAACGAT 110225 Query 8727 ATTCAAGTCCGAGTTGCGGCGCTTGTATCGCGAATGCGGCCGGCTCGGGATGATTGTCGT 8786 | | ||| | || ||| || ||||| || | ||| || |||| | || Sbjct 110224 GTCCGCACCCGCGCC-CGCCGCGTGGCGCGCGAGCAGGGGCCGCTGGGCCTGATCATGGT 110166 Query 8787 TGACTACCTGCAGCTGATGTCGGGTGACGGCGGC--GGATCTGAA-ATGCGGGCCACCGA 8843 |||||||||||||| ||| || ||| | |||| ||| ||| | || | || ||| Sbjct 110165 CGACTACCTGCAGCTCATG-CGCGTGCC--CGGCCTGGA---GAACAACCGCGTCAACGA 110112 Query 8844 GGTCGCCGAAATATCGCGCGCACTCAAACAAATTGCGAAGGAACTCGACGTTCCGATCAT 8903 || | || || |||||| | || || | |||||||| | || ||| | || Sbjct 110111 AATCTCGGAGATCTCGCGCTCGCTGAAGGCGCTGGCGAAGGAGATGGAGTGCCCGGTGAT 110052 Query 8904 CGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAATCGCCCAAACAAGCGGCCCGTCATGTC 8963 ||||||||||||||| || || ||| || | ||||| |||||||| || |||||||| Sbjct 110051 CGCGCTGTCGCAGCTCAACCGCTCGCTGGAACAGCGCCCCAACAAGCGCCCGGTCATGTC 109992 Query 8964 CGATCTGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGTGATCCTCTTTATCTACCG 9023 ||| ||||| ||||| || || ||||||||||| |||||||||||| | || |||||||| Sbjct 109991 CGACCTGCGTGAGTCCGGGGCCATCGAGCAGGACGCCGACGTGATCATGTTCATCTACCG 109932 Query 9024 CGATGAGGTCTATAACCCCGACAGCGCAGATCGCGGTACGGCCGAAATCATCATTGCGAA 9083 ||| |||||||| ||||| || | || || |||||||| |||||||| | || Sbjct 109931 CGACGAGGTCTACAACCCGGAGTCGCCGGACAAGGGCACGGCCGAGATCATCATCGGTAA 109872 Query 9084 GCAGCGAAACGGGCCGATTGGCACCGTACGGCTCGCATTCC 9124 |||||| ||||| || || |||| | | || ||||| |||| Sbjct 109871 GCAGCGTAACGGCCCCATCGGCAGCATCCGCCTCGCCTTCC 109831 >seq7 Length=747525 Score = 147 bits (162), Expect = 6e-31 Identities = 232/330 (70%), Gaps = 3/330 (1%) Strand=Plus/Minus Query 8776 ATGATTGTCGTTGACTACCTGCAGCTGATGTCGGGTGACGGCGGCGGATCTGAAATGCGG 8835 |||||| | || ||||| |||||||||||| ||| ||| | || | |||| || Sbjct 720415 ATGATTATGGTCGACTATCTGCAGCTGATGACGGTACCCGG--GATGAGC-GAAAACCGC 720359 Query 8836 GCCACCGAGGTCGCCGAAATATCGCGCGCACTCAAACAAATTGCGAAGGAACTCGACGTT 8895 || ||| |||||||||| || ||| | | ||| | || || ||| | | || Sbjct 720358 ACCCTGGAGATCGCCGAAATTTCCCGCTCGTTAAAAGCCCTGGCAAAAGAATTGAAAGTG 720299 Query 8896 CCGATCATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAATCGCCCAAACAAGCGGCCC 8955 ||| | ||||||| ||||||||||| || || || | ||| | | |||||||| Sbjct 720298 CCGGTAGTCGCGCTATCGCAGCTTAACCGTTCACTGGAACAACGCGCCGATAAGCGGCCA 720239 Query 8956 GTCATGTCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGTGATCCTCTTT 9015 || | || || |||| || |||||| |||| || |||||||| || |||| | ||| Sbjct 720238 GTTAACTCGGACTTGCGGGAATCGGGTTCGATAGAACAGGATGCGGATTTGATTATGTTT 720179 Query 9016 ATCTACCGCGATGAGGTCTATAACCCCGACAGCGCAGATCGCGGTACGGCCGAAATCATC 9075 ||||| || ||||||||||| || || | |||||| |||||||| ||||| || Sbjct 720178 ATCTATCGTGATGAGGTCTACCACGAGGATACAGCAGATAAAGGTACGGCTGAAATTATT 720119 Query 9076 ATTGCGAAGCAGCGAAACGGGCCGATTGGC 9105 || | |||||||| ||||| || |||||| Sbjct 720118 ATCGGTAAGCAGCGGAACGGCCCAATTGGC 720089 >seq40996 Length=10690 Score = 129 bits (142), Expect = 1e-25 Identities = 161/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 8902 ATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAATCGCCCAAACAAGCGGCCCGTCATG 8961 || || || || |||||||| || | || ||||| || |||||||| || || || ||| Sbjct 1407 ATTGCACTTTCACAGCTTAACCGTAGTCTAGAGAACCGACCAAACAAACGCCCTGTTATG 1466 Query 8962 TCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGTGATCCTCTTTATCTAC 9021 || || | || || || || |||||||||||||||||||| ||||| | || |||||| Sbjct 1467 TCAGACTTACGTGAATCAGGAGCGATCGAGCAGGATGCCGATTTGATCATGTTCATCTAC 1526 Query 9022 CGCGATGAGGTCTATAACCCCGACAGCGCAGATCGCGGTACGGCCGAAATCATCATTGCG 9081 || ||||| ||||||||| || ||| || || || |||||||| || | Sbjct 1527 CGTGATGAAGTCTATAACAAAGAATCAAAAGAAGCAGGCACAGCAGAAATCATTATCGGT 1586 Query 9082 AAGCAGCGAAACGGGCCGATTGGCACCGTACGGCTCGCATT 9122 || || || ||||| |||||||| || || || || || || Sbjct 1587 AAACAACGTAACGGTCCGATTGGTACTGTTCGTCTTGCCTT 1627 >seq100 Length=411593 Score = 125 bits (138), Expect = 2e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 8911 TCGCAGCTTAATCGAGGGCTCGAGAATCGCCCAAACAAGCGGCCCGTCATGTCCGATCTG 8970 || ||||| || ||| | || || |||||||||||||| || || || ||||| || || Sbjct 332032 TCTCAGCTCAACCGAAGTCTGGAAAATCGCCCAAACAAACGACCAGTAATGTCTGACTTG 331973 Query 8971 CGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGTGATCCTCTTTATCTACCGCGATGAG 9030 || || || || ||||||||||| |||||||| |||| | ||||| || || |||||| Sbjct 331972 CGTGAATCTGGAGCGATCGAGCAAGATGCCGATTTGATTATGTTTATTTATCGTGATGAG 331913 Query 9031 GTCTATAACCCCGACAGCGCAGATCGCGGTACGGCCGAAATCATCATTGCGAAGCAGCGA 9090 || |||||| || ||| || || || ||||||||||||| || ||||| Sbjct 331912 GTTTATAACAAAGAATCTAAAGAGGCTGGAACAGCAGAAATCATCATTGGTAAACAGCGT 331853 Query 9091 AACGGGCCGATTGGCACCGTACGGCTCGCATT 9122 || || || ||||| || || || || || || Sbjct 331852 AATGGACCTATTGGTACTGTCCGTCTTGCCTT 331821 >seq32195 Length=14812 Score = 122 bits (134), Expect = 2e-23 Identities = 190/272 (70%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 8842 GAGGTCGCCGAAATATCGCGCGCACTCAAACAAATTGCGAAGGAACTCGACGTTCCGATC 8901 ||| |||| ||||| || || || | ||| | | || || ||||| | |||| | Sbjct 1538 GAGATCGCTGAAATCTCTCGTTCATTAAAAGCACTGGCAAAAGAACTGCAGTGTCCGGTT 1479 Query 8902 ATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAATCGCCCAAACAAGCGGCCCGTCATG 8961 || || || ||||||||||| || || ||| | || | | || || || ||| Sbjct 1478 ATTGCACTATCGCAGCTTAACCGTACCCTAGAGCAACGTGCCGATAAACGCCCAATCAAC 1419 Query 8962 TCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGTGATCCTCTTTATCTAC 9021 ||||| | || || || || | |||||||||||||||||| | ||| | ||||| ||| Sbjct 1418 TCCGACTTACGTGAATCAGGCTCAATCGAGCAGGATGCCGACTTAATCATGTTTATTTAC 1359 Query 9022 CGCGATGAGGTCTATAACCCCGACAGCGCAGATCGCGGTACGGCCGAAATCATCATTGCG 9081 || ||||| || |||||| ||||| ||||| || ||||||||||||||| | Sbjct 1358 CGTGATGAAGTGTATAACGAAGACAGTGCAGAAAAAGGCGTGGCCGAAATCATCATAGGT 1299 Query 9082 AAGCAGCGAAACGGGCCGATTGGCACCGTACG 9113 ||||| || ||||| || || || | ||||| Sbjct 1298 AAGCAACGTAACGGTCCAATCGGTAAAGTACG 1267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127272613833456