Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_013597.1 Length=43970 Score E Sequences producing significant alignments: (Bits) Value seq42597 98.7 3e-16 >seq42597 Length=6154 Score = 98.7 bits (108), Expect = 3e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 27138 TCCAACCAAGCCACCTTATCTGCGCCGATTTTATTGACGAGATTAATCCGGTACTCAATG 27197 |||| ||| | ||||| || |||||||| || || || || || ||||| | | | Sbjct 1931 TCCAGCCACTCGACCTTCTCGGCGCCGATCTTGCGCACTAGGTTGATTCGGTAATTCACG 1872 Query 27198 ATGTTTCCGCTTTTGTGGTCATTACAGGGTGCGCATTGCTTATGTACGTTTAACT-CACA 27256 |||| ||| |||||||| || || || |||||||| || || ||||| ||| | | Sbjct 1871 ATGTCGCCGGATTTGTGGTTGTTGCATGGGGCGCATTGTTTGTGGACGTTCAACGGCTCG 1812 Query 27257 AAATCTTAATTCCGGGCAGGCACCAACACTGCGATAATGCCCGGCATGGTATTGTCCTTG 27316 ||| | | || |||| |||| |||| |||| || |||||||| || || || || | Sbjct 1811 AAA-CGCAGCTCGGGGCTGGCAGCAACCGTGCGGTAGTGCCCGGCGTGATACTGCCCGTC 1753 Query 27317 ATGATATCGCCCGCAACTGATACAAGGTTGGTC 27349 |||| || ||||||||||| || || || || Sbjct 1752 GTGATGGCGACCGCAACTGATGCACGGCTGATC 1720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140281511137824