Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_013647.1 Length=41119 Score E Sequences producing significant alignments: (Bits) Value seq34826 111 4e-20 >seq34826 Length=13225 Score = 111 bits (122), Expect = 4e-20 Identities = 274/412 (67%), Gaps = 14/412 (3%) Strand=Plus/Minus Query 9433 TAGACCTCATCGTTAAGACCCATGAGGAAAACTACGCT--GCTCGT--CTGGAAGCACAC 9488 |||||| |||||| || | ||| |||| ||||||| || ||| ||| || || Sbjct 8748 TAGACCGCATCGTGAAAATCCACGAGGCCGACTACGCGAAGCGCGTGACTG--AGTTCAA 8691 Query 9489 GAAGCGAACCCGCCTAAGGTTCAGAAGGGTAAGAAGCCCCTGAAGCCGTACGAAGGCGAC 9548 |||| ||||| || || | | | | |||||| || ||||||| |||||||| Sbjct 8690 GAAG--AACCCTCCGCAGACGCCAAGTGCCAGGAAGCCACTCCAGCCGTATCAAGGCGAC 8633 Query 9549 ATGCCGTTCTTCGACAACGGGGATGGTACCACCACGTTCAACTTCAAGTGCTACGGTTCG 9608 |||| ||| |||||||||| || || |||| | | |||||||| | ||| | | Sbjct 8632 CTGCCCTTCATCGACAACGGTGACGG------CACGGTGACCTTCAAGTTCGTCGGCTGG 8579 Query 9609 TACGAGGACAAGAAGACTGGCGAGACCAAGAAGATTGTTCTGGGTGTAGTTGATGCCAAG 9668 | || ||||| ||||||| | ||| ||| |||| ||||| |||||| Sbjct 8578 GCCAGCTACGAGAAGGACGGCGAGATGATCCCGATCCCCCTGCGTGTCGTTGACGCCAAG 8519 Query 9669 GGTAAACGCATCCAAGACGTTCCGATTATCGGCGGTGGTTCCAAAGTGAAGATTCGCTTC 9728 || || |||| || || |||| ||| ||||| ||| | | ||| | |||||| Sbjct 8518 GGCAAGGCCATCGCTGATGTCCCGAACATCTCGGGTGGCTCCGAGGGCAAGGTCCGCTTC 8459 Query 9729 TCTCTGGTACCGTATGGCTGGTCGGCGGTAGCTGGCGCTTCCGTTAAGTTGCAGCTGGAA 9788 || | || || || |||||| || | ||||| ||||| ||| | || |||||| Sbjct 8458 TCCATCGTCCCCTACGGCTGGAACCCGACCGTGGGCGCCTCCGTGAAGCTCCAACTGGAA 8399 Query 9789 GGCGTGATGCTGGTCGAACTGGCTACCTTTGGTGGTGGCGAAGACGACTGGG 9840 ||| | |||||| | |||||| | | || ||| |||||||||||| Sbjct 8398 GGCTTCATGCTGACCAAACTGGTCGAGTCAGATGATGGTCAAGACGACTGGG 8347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131177837545592