Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_013693.1 Length=158006 Score E Sequences producing significant alignments: (Bits) Value seq5 114 1e-20 >seq5 Length=869209 Score = 114 bits (126), Expect = 1e-20 Identities = 283/427 (66%), Gaps = 2/427 (0%) Strand=Plus/Minus Query 53640 AACCAGGCGCTCAAACATCACGCGGTTGATCTGAATACCGTAGTCGATACGGCGTTCGCG 53699 || |||||||| | |||||| |||||| | ||| | || ||||| | | | | | | || Sbjct 711187 AATCAGGCGCTGATACATCAGGCGGTTAAACTGCACGCCATAGTCCAGATGCCTTACCCG 711128 Query 53700 GTTTTCTTCAGTGCCACGGTTATTCTTCAGTACAACGACGTCATCGAACTGGTA-ATGCC 53758 ||| ||||| || |||||||| |||||||| | | | || ||| | ||||| Sbjct 711127 GTTCTCTTCTACACCGCGGTTATTTTTCAGTACCAGCA-GCGATTCCACTTCCAGATGCC 711069 Query 53759 ACAGAGGGATGTACGCTGTCGCCGCACCACCACGAATGCCGCCCTGGGAGCAAGACTTGA 53818 ||| ||| | || || || ||||||||||| | ||||| || ||||| || | Sbjct 711068 ACAAGGGGTAGAACAGGGTGGCGGCACCACCACGCACACCGCCTTGCGAGCAGCTTTTTA 711009 Query 53819 GCGCCCCAGTGAGATACTTGATGAATGGGATCAGGCCTGTGTGAACCATCTCTCCGCCGC 53878 || || || ||| || ||||| ||| || |||| || || | Sbjct 711008 CTGCGGTCTGGAAATGCTTATAAAACGGGATACAGCCAGTATGAAAGGCTTCGCCATTAC 710949 Query 53879 GAATAGGACTGCCAATCCCACGGATAGCCCCGACGTCAAAGCCGATACCCGCACGTTTGG 53938 | || || || || | | || ||| || ||| || || ||||| || || | | Sbjct 710948 GGATTGGGCTACCTAAAGCGCGAATACGGCCTGCGTTAATACCAATACCTGCGCGCTGCG 710889 Query 53939 ACACATAGTCAACGATGGTCTTGGCCGTTGCGTTGATAGAGTCCAGGGTGTCACCAGTTT 53998 |||| || | || |||| ||| || || ||||| || |||||| |||||||| | Sbjct 710888 ACACGTATTTTACAATGGCACTGGAGGTGGCATTGATCGAATCCAGGCTGTCACCACACT 710829 Query 53999 TGATCAGGACACAGGAACTGAACTGACGGGTAGGAGTACGAACACCTGCCATAATCGGGG 54058 ||||| || ||||| |||||||||||||| || ||||| || || | |||||| || | Sbjct 710828 CAATCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTACGCACGCCCGACATAATAGGTG 710769 Query 54059 TGGGAAG 54065 | || || Sbjct 710768 TCGGCAG 710762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504352353600960