Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq2234 118 7e-22
>seq2234
Length=154088
Score = 118 bits (130), Expect = 7e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 39511 ACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCC 39570
|||| ||||| ||| ||||||||| || |||||||| | || | || |||| ||
Sbjct 12086 ACCAGATGCAGAGTAGATTCTTTTTGAATGTTATAATCCGACAGAGTACGGCCATCTTCT 12027
Query 39571 AATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCAT 39630
| ||| || || |||||||||||||||||||||| | ||| | |||||||||||
Sbjct 12026 AGTTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGGGGAATTCCTTCTTTGTCCTGG 11967
Query 39631 ATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTA 39690
|||||| ||||| | | | || || ||| || || || ||||||||||||
Sbjct 11966 ATTTTTGCTTTAACATTTTCAATGGTATCACTTGGTTCGACTTCTAATGTAATTGTTTTA 11907
Query 39691 CCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| |||| ||| ||||| || || ||||||
Sbjct 11906 CCTGTTAGAGTCTTTACAAAAATTTGCATG 11877
Score = 95.1 bits (104), Expect = 8e-15
Identities = 160/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| ||| | ||| || ||||| || || ||||||||| || || ||||| |
Sbjct 11648 CCTCCTCTCAACCTCAGAACTAAATGTAATGTAGATTCTTTTTGGATGTTGTAATCAGAA 11589
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | || |||| ||||| || || || ||||||||| | ||| ||||| | |||
Sbjct 11588 AGAGTACGACCATCTTCCAACTGCTTACCAGCAAAAATTAGCCTCTGTTGATCTGGGGGG 11529
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGT--CTGCGCTTTCCA 39670
| ||||||||||| ||||| ||| | | ||| ||||| || || || |
Sbjct 11528 ATACCTTCTTTGTCTTGAATTTTGGCTTTGACGTTTTCTATTGTGTCACTAGGC--TCTA 11471
Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
| ||||| || || ||||| || |||| ||||| ||||| || ||||||
Sbjct 11470 CTTCCAAGGTGATGGTTTTGCCAGTTAGGGTTTTCACGAAAATTTGCATG 11421
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346606558818188
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |