Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_014036.1 Length=174436 Score E Sequences producing significant alignments: (Bits) Value seq5 201 1e-46 seq100896 123 3e-23 seq76955 82.4 9e-11 >seq5 Length=869209 Score = 201 bits (222), Expect = 1e-46 Identities = 324/462 (70%), Gaps = 8/462 (2%) Strand=Plus/Plus Query 41091 TCTCTACCGACTCCAATTATGGCGGGTGTACGTACTCCTACGCGCCAGTTCTCCAGTTGT 41150 || || ||||| || |||||| |||| || ||||| || || || |||||| | || Sbjct 710759 TCACTGCCGACACCTATTATGTCGGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCTGC 710818 Query 41151 GTAGTAATTGAATCGGGTGATTCTCTTGGTTCTCTTAACGCTGTAACCTC---TGCGATC 41207 ||| | ||||| | ||||| || | ||| | || || ||||| ||| || Sbjct 710819 GTACTGATTGAGTGTGGTGACAGCCTGGATTCGATCAATGCC---ACCTCCAGTGCCATT 710875 Query 41208 GTGAAGTATATTTCACAACGTGCTGGTATTGGGGTTAACGCGGGACATATTCGCGCAATG 41267 || || || | || || || || |||||||| ||||||| || | ||||||||| | Sbjct 710876 GTAAAATACGTGTCGCAGCGCGCAGGTATTGGTATTAACGCAGGCCGTATTCGCGCTTTA 710935 Query 41268 GGTTCTAAAATCCGTGGTGGTGAAGCTGTTCATACTGG-TGTGATTCCTTTCTGGAAACA 41326 ||| ||||||| ||| ||||| |||||||||| ||| || || || | || || Sbjct 710936 GGTAGCCCAATCCGTAATGGCGAAGCCTTTCATACTGGCTGT-ATCCCGTTTTATAAGCA 710994 Query 41327 TATCCAAACCGCTGTTAAATCCTGTTCACAGGGTGGCGTTCGTGGTGGTGCTGCAACACT 41386 | |||| ||||| || ||| ||| || || || || || ||||||||||| || || || Sbjct 710995 TTTCCAGACCGCAGTAAAAAGCTGCTCGCAAGGCGGTGTGCGTGGTGGTGCCGCCACCCT 711054 Query 41387 GTATTATCCTTTCTGGCATCTGGAAGTTGAAAACCTTCTGGTGTTGAAGAACAACAAAGG 41446 || || || || |||||||||||||| ||| || ||||| |||| || ||| || Sbjct 711055 GTTCTACCCCTTGTGGCATCTGGAAGTGGAATCGCTGCTGGTACTGAAAAATAACCGCGG 711114 Query 41447 CGTAGAAGAAAACCGCGTTCGTCATCTTGATTACGGTGTACAGCTTAACCAGTTGATGTA 41506 |||||||| ||||| || | ||||| || || || || ||| |||||| ||||||| Sbjct 711115 TGTAGAAGAGAACCGGGTAAGGCATCTGGACTATGGCGTGCAGTTTAACCGCCTGATGTA 711174 Query 41507 TAAACGCTTAATGAATCGTGATTACATTACGCTGTTTAGTCC 41548 | | ||| | || || ||| || || || |||| || || Sbjct 711175 TCAGCGCCTGATTAAAGATGACTATATCACCTTGTTCAGCCC 711216 Score = 91.5 bits (100), Expect = 2e-13 Identities = 195/285 (68%), Gaps = 10/285 (4%) Strand=Plus/Plus Query 42874 TTTTCGAAAGCCTGACGCAAAAACAACTTTCTTTCTTCTGGCGTCCGGAAGAAGTCGATC 42933 |||| |||| |||| |||| || || || |||||||| |||||||| | || Sbjct 712605 TTTTTGAAAAGCTGATCGAAAAGCAGCTGAGCTTTTTCTGGCGGCCGGAAGAGATTGACG 712664 Query 42934 TGTCTACTGACCGTATGCAGTATGCAAAACTT-CCTGAACATGAAAAA---ATCATTTTC 42989 | || || || || | | | || | || ||||| ||||||||| ||| || || Sbjct 712665 TCAGTAAAGATCGGATTGATT-TCCAGCAATTACCTGAGCATGAAAAACATATCTTTATC 712723 Query 42990 GATTCTAACCTACAGTATCAAACCCTGTTAGATACCATTCAGGGACGTGGGCCTAACCTC 43049 || || | || || || ||| | || | | ||||| || ||| ||| || Sbjct 712724 AGC---AATCTGAAATACCAGACGCTGCTGGACTCAGTGCAGGGTCGCTCGCCGAACGTC 712780 Query 43050 GCATTTTTGCCAATTGCATCCGATGTG-AGCATGGAAACCTGGATCGAAACGTGGGCGTT 43108 || | ||||| |||| || | | ||| ||||||||||||| ||||| ||||| || Sbjct 712781 GCCCTGTTGCCGATTGTGTCTATTCCGGAGC-TGGAAACCTGGATTGAAACCTGGGCCTT 712839 Query 43109 TAGTGAAACCATCCACAGCCGTAGTTACACGCATATTCAACGTAA 43153 |||||||||||| |||||||| || ||||| |||||| ||||| Sbjct 712840 TAGTGAAACCATTCACAGCCGCAGCTACACCCATATTATCCGTAA 712884 >seq100896 Length=2131 Score = 123 bits (136), Expect = 3e-23 Identities = 255/371 (69%), Gaps = 9/371 (2%) Strand=Plus/Plus Query 42796 ATCATAACCACTTAGATCAACCTATGTTTTTTGGTGAA--GATACTGGTGTTGCACGTTA 42853 || ||||||| ||| | |||| |||||||| || || | || |||| ||||||| Sbjct 555 ATAATAACCAATTACAAGAACCGATGTTTTTCGGCCAAACGGTAAACGTGT--CACGTTA 612 Query 42854 TGAATCGCAGAAACACAAAGTTTTCGAAAGCCTGACGCAAAAACAACTTTCTTTCTTCTG 42913 || || || || | ||||||| || | |||| |||||||| ||||| || Sbjct 613 CGACCAACAAAAGTACCCTATCTTCGAAAAGCTAATCGAAAAGCAACTTTCGTTCTTTTG 672 Query 42914 GCGTCCGGAAGAAGTCGATCTGTCTACTGACCGTATGCAGTATGCAAAACTT-CCTGAAC 42972 |||||| |||||||| ||| | || |||||| | | | | ||| || || |||| Sbjct 673 GCGTCCTGAAGAAGTTGATGTAAGTAAAGACCGTCTTGACT-TCCAAGCGTTACCAGAAC 731 Query 42973 ATGAAAAAATCATTTTCGATTCTAACCTACAGTATCAAACCCTGTTAGATACCATTCAGG 43032 | ||||| ||| || |||| || | |||||||| || | |||| | || | Sbjct 732 ACGAAAAGCACATATTTTTAAGTAACTTAAAATATCAAACGCTTCTTGATAGTGTACAAG 791 Query 43033 GACGTGGGCCTAACCTCGCATTTTTGCCAATTGCATCCGATG-TGAGCATGGAAACCTGG 43091 | ||| |||||| | || || || || |||| || | |||| | ||||| ||| Sbjct 792 GCCGTTCACCTAACGTTGCGTTATTACCTATTGTGTCTATTCCTGAGT-TAGAAACTTGG 850 Query 43092 ATCGAAACGTGGGCGTTTAGTGAAACCATCCACAGCCGTAGTTACACGCATATTCAACGT 43151 || ||||| |||||||| ||||||||||| || |||||| |||||||| ||| ||| Sbjct 851 ATTGAAACATGGGCGTTCAGTGAAACCATTCATAGCCGTTCATACACGCACATTATTCGT 910 Query 43152 AAC-TTACACA 43161 ||| |||| || Sbjct 911 AACGTTACGCA 921 >seq76955 Length=4939 Score = 82.4 bits (90), Expect = 9e-11 Identities = 67/79 (85%), Gaps = 2/79 (3%) Strand=Plus/Plus Query 49400 TGGCCCCTTAGCTCAATAGG-TAGAGCTAATCACTCATAATGGTTAGGTTCCCGGTTCAA 49458 ||||||||||||||| | || |||||| | ||||||||| ||||||| ||| |||||| Sbjct 748 TGGCCCCTTAGCTCAGTTGGTTAGAGCACACGACTCATAATCGTTAGGTCCCCAGTTCAA 807 Query 49459 GTCACGGGAGGGGCCACCA 49477 ||| |||||||||||||| Sbjct 808 GTC-TGGGAGGGGCCACCA 825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556809902501760