Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_014260.1 Length=172253 Score E Sequences producing significant alignments: (Bits) Value seq5 111 2e-19 >seq5 Length=869209 Score = 111 bits (122), Expect = 2e-19 Identities = 276/419 (66%), Gaps = 0/419 (0%) Strand=Plus/Minus Query 144908 CATCAGGTCATTCAACTGGATTCCGTAGTCCATATGTCGAATACGGTTTTCATCAACGCC 144967 ||||||| || ||||| | || ||||||| ||| | | ||||| || || || || Sbjct 711172 CATCAGGCGGTTAAACTGCACGCCATAGTCCAGATGCCTTACCCGGTTCTCTTCTACACC 711113 Query 144968 CTTGTTATTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 145027 |||||||||||| || ||||| ||| ||||||| |||||| | || || | Sbjct 711112 GCGGTTATTTTTCAGTACCAGCAGCGATTCCACTTCCAGATGCCACAAGGGGTAGAACAG 711053 Query 145028 AGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATG 145087 || || || || ||||| | || ||||| || || ||| || || ||||||||||| Sbjct 711052 GGTGGCGGCACCACCACGCACACCGCCTTGCGAGCAGCTTTTTACTGCGGTCTGGAAATG 710993 Query 145088 TTTCCAGAATGGAATAACACCGGTATGTTTGACTTCACCCATGCCAATACGAGAACCTTC 145147 || | || || ||| || ||||| | |||| || | | || | |||| Sbjct 710992 CTTATAAAACGGGATACAGCCAGTATGAAAGGCTTCGCCATTACGGATTGGGCTACCTAA 710933 Query 145148 AGCACGAATCATACCAACGTTGATACCAATACCTGCACGTTTAGAAATGTATTCAATTAT 145207 ||| ||||| || |||| |||||||||||||| || | || | ||||| | || Sbjct 710932 AGCGCGAATACGGCCTGCGTTAATACCAATACCTGCGCGCTGCGACACGTATTTTACAAT 710873 Query 145208 CGAGTTAGCAGTTTTGTTAATAGATTTCAGCGAGTCGCCTGCTTCAATAACCACACAAGA 145267 | | | || || || || | ||| ||| || ||||| | || || || Sbjct 710872 GGCACTGGAGGTGGCATTGATCGAATCCAGGCTGTCACCACACTCAATCAGTACGCAGGA 710813 Query 145268 ACTAAATTGGCGAGTCGGTGTACGCGCTCCAGCCATAATAGGGGTAGGCAACGAAACCT 145326 || || || || || || |||||| | || | ||||||||| || |||| |||| || Sbjct 710812 GCTGAACTGACGGGTTGGGGTACGCACGCCCGACATAATAGGTGTCGGCAGTGAAATCT 710754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549840040709280