Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_014458.1 Length=59598 Score E Sequences producing significant alignments: (Bits) Value seq12585 105 3e-18 >seq12585 Length=48618 Score = 105 bits (116), Expect = 3e-18 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 53370 TGGCGCTGATGCCTGATGCGCATTTCGGTAAGGGCAGCAGTGTCGGCACGGTGATCCCGA 53429 ||||| ||||||| || | ||| | ||||||||| | |||||| |||||||| | Sbjct 44280 TGGCGGTGATGCCGGACGTGCACCTGGGTAAGGGCTCGACCATCGGCAGCGTGATCCCCA 44221 Query 53430 CCGAGGGCGCTGTGATCCCGGCGGCCGTCGGCGTCGATATTGGCTGCGGCATGATCGCAG 53489 | | ||||| | |||||||||||||| || || ||||| || |||||||||||||| | Sbjct 44220 CGGTCGGCGCGATTATCCCGGCGGCCGTTGGTGTGGATATCGGTTGCGGCATGATCGCCG 44161 Query 53490 CCCGCACCACG 53500 | ||||||||| Sbjct 44160 CGCGCACCACG 44150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190184075465920