Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_014467.1 Length=176788 Score E Sequences producing significant alignments: (Bits) Value seq5 233 2e-56 seq100896 107 2e-18 seq51 87.8 2e-12 >seq5 Length=869209 Score = 233 bits (258), Expect = 2e-56 Identities = 329/461 (71%), Gaps = 6/461 (1%) Strand=Plus/Plus Query 41140 TCATTACCTACGCCTATTATGGCGGGTGTGCGTACTCCTACGCGTCAGTTCTCCAGTTGT 41199 ||| | || || ||||||||| |||| |||||||| || || ||||||||| | || Sbjct 710759 TCACTGCCGACACCTATTATGTCGGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCTGC 710818 Query 41200 GTTGTAATCGAATCTGGTGATTCTCTGGGTTCTCTGAACGCTGTTACGTCC---GCGATC 41256 || | || || | |||||| |||| ||| | || || || ||| || || Sbjct 710819 GTACTGATTGAGTGTGGTGACAGCCTGGATTCGATCAATGCC---ACCTCCAGTGCCATT 710875 Query 41257 GTGAAATATATCTCTCAACGTGCGGGTATCGGTGTCAACGCCGGACACATTCGCGCTATG 41316 || ||||| | || || || || ||||| ||| | ||||| || | ||||||||| | Sbjct 710876 GTAAAATACGTGTCGCAGCGCGCAGGTATTGGTATTAACGCAGGCCGTATTCGCGCTTTA 710935 Query 41317 GGTTCAAAAATCCGTGGTGGTGAAGCAGTCCATACAGGCGTTATCCCGTTCTGGAAACAC 41376 ||| ||||||| ||| ||||| | ||||| ||| ||||||||| | || || Sbjct 710936 GGTAGCCCAATCCGTAATGGCGAAGCCTTTCATACTGGCTGTATCCCGTTTTATAAGCAT 710995 Query 41377 ATTCAGACGGCGGTTAAATCTTGTTCCCAGGGTGGCGTTCGTGGTGGTGCAGCAACCCTG 41436 | ||||| || || ||| || || || || || || ||||||||||| || |||||| Sbjct 710996 TTCCAGACCGCAGTAAAAAGCTGCTCGCAAGGCGGTGTGCGTGGTGGTGCCGCCACCCTG 711055 Query 41437 TATTATCCGATCTGGCATCTTGAAGTTGAAAACCTGCTGGTTCTGAAAAATAACCGTGGC 41496 | || || | |||||||| ||||| ||| |||||||| |||||||||||||| || Sbjct 711056 TTCTACCCCTTGTGGCATCTGGAAGTGGAATCGCTGCTGGTACTGAAAAATAACCGCGGT 711115 Query 41497 GTTGAAGAAAACCGTATTCGTCACCTGGACTATGGCGTACAGCTTAACGATTTGATGTAT 41556 || ||||| ||||| | | || |||||||||||||| ||| ||||| |||||||| Sbjct 711116 GTAGAAGAGAACCGGGTAAGGCATCTGGACTATGGCGTGCAGTTTAACCGCCTGATGTAT 711175 Query 41557 AAGCGTTTAATCAATAACGATTACATCACTCTGTTCAGCCC 41597 |||| | || || | || || ||||| |||||||||| Sbjct 711176 CAGCGCCTGATTAAAGATGACTATATCACCTTGTTCAGCCC 711216 Score = 89.7 bits (98), Expect = 6e-13 Identities = 133/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 42547 GGTTATCTGGCTCACGTAGCGGTTATGCAGAAGTTTGTTGATCAGGCTATCTCTGCAAAC 42606 ||||||||| | | || || |||||||||| ||| | || ||| | || || || ||| Sbjct 712172 GGTTATCTGACGCTGGTGGCCATTATGCAGAAATTTATCGACCAGACCATTTCGGCTAAC 712231 Query 42607 ACCAACTATGATCCGGCTAACTTCCCAGATGGTAAAGTGAAATCTGAA-ATCATCCTTGA 42665 ||||||||||||||||| || ||| || |||||||| | |||| ||| | || | Sbjct 712232 ACCAACTATGATCCGGCCAAGTTCGAAGGCGGTAAAGT-ACCGATGAAGATCCTGCTGAA 712290 Query 42666 AGATCTGCTGTATGCAAACTATTTCGGCATCAAAACGCTGTACTACCACAACACCCGCGA 42725 ||||||||| || | | | || | || || |||| || ||||||||||| || Sbjct 712291 AGATCTGCTTACCGCTTATAAGCTGGGTGTGAAGACAATGTATTATCACAACACCCGTGA 712350 Query 42726 CGGTGC 42731 ||||| Sbjct 712351 TGGTGC 712356 >seq100896 Length=2131 Score = 107 bits (118), Expect = 2e-18 Identities = 209/303 (69%), Gaps = 12/303 (4%) Strand=Plus/Plus Query 43378 CGATACGAAGAACAAAAGCATCGTGTGTTTGAAAATCTTACGGAAAAACAGTTATCCTTC 43437 || ||||| |||||||| | | | | || ||||| || | ||||| || | || ||| Sbjct 608 CGTTACGACCAACAAAAGTACCCTATCTTCGAAAAGCTAATCGAAAAGCAACTTTCGTTC 667 Query 43438 TTTTGGCGTCCAGAAGAAATTGACTTATCGATCGACCGTATGCAGTAC---GCGAAAATG 43494 ||||||||||| |||||| |||| || | |||||| | | | | ||| | Sbjct 668 TTTTGGCGTCCTGAAGAAGTTGATGTAAGTAAAGACCGTCTTGACTTCCAAGCGTTA--- 724 Query 43495 CCGGAACACGAAAAAATCAT--TTTCGATTCGAACCTGCAATATCAAACCCTGTTGGATA 43552 || ||||||||||| ||| ||| | | ||| | |||||||||| || | |||| Sbjct 725 CCAGAACACGAAAAGCACATATTTTTAAGT--AACTTAAAATATCAAACGCTTCTTGATA 782 Query 43553 CCATTCAGGGGCGCGGCCCTAACCTGGCTTTCCTCCCTATCGCTTCCGATGTCTC-GATG 43611 | || || || |||||| | || || | ||||| | || || || | | Sbjct 783 GTGTACAAGGCCGTTCACCTAACGTTGCGTTATTACCTATTGTGTCT-ATTCCTGAGTTA 841 Query 43612 GAAACGTGGATCGAAACATGGGCGTTCAGTGAAACAATCCATAGCCGCAGTTATACGCAC 43671 ||||| ||||| ||||||||||||||||||||||| || |||||||| || |||||| Sbjct 842 GAAACTTGGATTGAAACATGGGCGTTCAGTGAAACCATTCATAGCCGTTCATACACGCAC 901 Query 43672 ATT 43674 ||| Sbjct 902 ATT 904 >seq51 Length=473680 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 49775 AATTCCGGCCCTTTAGCTTAATTGGTTAGAGCGGGTGACTCATAATCGCGCGGTTGCTGG 49834 ||||| ||||| ||||| | ||||||||||| |||||||||||| |||| ||||| Sbjct 469222 AATTCAGGCCCCATAGCTCAGTTGGTTAGAGCACTCGACTCATAATCGATCGGTCGCTGG 469281 Query 49835 TTCGAATCCAGCAGGGGCCACCA 49857 ||||| |||||| |||||||||| Sbjct 469282 TTCGAGTCCAGCTGGGGCCACCA 469304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564319345898880