Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_014636.1 Length=225268 Score E Sequences producing significant alignments: (Bits) Value seq5 154 2e-32 seq100896 109 8e-19 seq15784 98.7 1e-15 seq7 93.3 6e-14 seq4 89.7 7e-13 seq14 87.8 3e-12 seq26 86.0 9e-12 >seq5 Length=869209 Score = 154 bits (170), Expect = 2e-32 Identities = 333/492 (68%), Gaps = 6/492 (1%) Strand=Plus/Minus Query 129013 GGACTGAACAAGGTAATATAGTCGTCGTTTTTCAACCGTTCTAACATCAGCTTATTGATT 129072 || ||||||||||| |||||||| || || ||| || | ||||||| || | Sbjct 711216 GGGCTGAACAAGGTGATATAGTCATCTTTAATCAGGCGCTGATACATCAGGCGGTTAAAC 711157 Query 129073 TGGATACCGTAGTCAAGATGTCGGATTCGGTTTTCTTCAACGCCCTTGTTATTCTTGAGC 129132 || | || ||||| ||||| | | ||||| ||||| || || |||||| || || Sbjct 711156 TGCACGCCATAGTCCAGATGCCTTACCCGGTTCTCTTCTACACCGCGGTTATTTTTCAGT 711097 Query 129133 ACAAGGATTTTTTCAACTTCGAGGTGCCACATTGGGTAATATAGAGTTGCGGCACCGCCG 129192 || || | ||| ||||| || ||||||| ||||| | || || |||||||| || Sbjct 711096 ACCAGCAGCGATTCCACTTCCAGATGCCACAAGGGGTAGAACAGGGTGGCGGCACCACCA 711037 Query 129193 CGAACACCACCCTGTGAACAGCTCTTTACCGCAGTCTGGAAGTATTTCCAAAATGGGATA 129252 || ||||| || || || ||||| ||||| || |||||||| | || |||| |||||| Sbjct 711036 CGCACACCGCCTTGCGAGCAGCTTTTTACTGCGGTCTGGAAATGCTTATAAAACGGGATA 710977 Query 129253 ATACCGGTATGTCGCACTTCACCGCTACGAATGCGAGATCCCT-CGGCACGAATCGCACC 129311 || ||||| |||| || |||| || | | | ||| || ||||| || Sbjct 710976 CAGCCAGTATGAAAGGCTTCGCCATTACGGAT-TGGGCTACCTAAAGCGCGAATACGGCC 710918 Query 129312 GCCGTTGATGCCGATACCAGCGCGTTTGCTGATA--TAGTCAACGATAGAACTAGCGGTA 129369 |||| || || ||||| ||||| ||| || | || | || || | ||| | ||| Sbjct 710917 TGCGTTAATACCAATACCTGCGCG-CTGC-GACACGTATTTTACAATGGCACTGGAGGTG 710860 Query 129370 GCGTTGATGCTATCCAGTTCGTCTCCACATTCGATCTTGACACAAGAGCTAAACTGCCGA 129429 || ||||| |||||| ||| ||||| || ||| || || ||||| ||||| || Sbjct 710859 GCATTGATCGAATCCAGGCTGTCACCACACTCAATCAGTACGCAGGAGCTGAACTGACGG 710800 Query 129430 GTCGGGGTGCGAACACCTGCGAGAATCGGAGTTGGCAGACTCAGCTTGCCAAGCGATGTT 129489 || ||||| || || || | | ||| || || ||||| | ||| ||||| || Sbjct 710799 GTTGGGGTACGCACGCCCGACATAATAGGTGTCGGCAGTGAAATCTTAAACAGCGACGTC 710740 Query 129490 ACGTCATAGAAG 129501 | ||||||||| Sbjct 710739 GCATCATAGAAG 710728 Score = 86.0 bits (94), Expect = 9e-12 Identities = 219/331 (66%), Gaps = 2/331 (1%) Strand=Plus/Minus Query 127428 CGGCTGTGAATCGTTTCACTAAAGCTCCAAGTAGTGATCCAAGTCTCCAGCGCGATGTCT 127487 ||||||||||| |||||||||||| ||| || ||||| || |||||| | Sbjct 712860 CGGCTGTGAATGGTTTCACTAAAGGCCCAGGTTTCAATCCAGGTTTCCAGCTCCGGAATA 712801 Query 127488 GACACCATTGGCAAGAAAGTCAAGTTAGGTGCGCGACCCTGAACAGAATCAAGCAGACTT 127547 ||||| || ||||| | | | ||| || | ||||||||| || || || ||||| | Sbjct 712800 GACACAATCGGCAACAGGGCGACGTTCGGCGAGCGACCCTGCACTGAGTCCAGCAGCGTC 712741 Query 127548 TGATATTTCA-AGTTTTGAGTGAACACATATTGTTCGGCTTCTGTCAAGCGACTGAAATC 127606 || ||||||| | | ||| | || | || || ||| || | || | |||||| Sbjct 712740 TGGTATTTCAGATTGCTGA-TAAAGATATGTTTTTCATGCTCAGGTAATTGCTGGAAATC 712682 Query 127607 AATCATGTCCTTAGACAAATCGACTTCTTCGGGGCGCCAGAAAAATGAGAGCTGTTTCTC 127666 |||| || ||| | || | ||||| || ||||||||||| ||||| || || Sbjct 712681 AATCCGATCTTTACTGACGTCAATCTCTTCCGGCCGCCAGAAAAAGCTCAGCTGCTTTTC 712622 Query 127667 GGTAAGCTTGTCAATGACAGGATGCTTCACAGTTTCATAACGAGCGAGACCCATCGCATC 127726 | | ||||| |||| | |||| ||| |||||||| | || | |||| Sbjct 712621 GATCAGCTTTTCAAAAATCGGATACTTTTGCTGATCATAACGGGAGACGTTTACGGCATT 712562 Query 127727 ACCAAGATACATCGGAGCCTTCATATGGTCA 127757 ||||| ||||||| |||| | |||||| Sbjct 712561 ACCAAAGAACATCGGTTCCTTGAGCTGGTCA 712531 >seq100896 Length=2131 Score = 109 bits (120), Expect = 8e-19 Identities = 188/269 (70%), Gaps = 8/269 (3%) Strand=Plus/Minus Query 126933 GCCCATTCTTTTTCTTGTTCGGCAGCGTCCAGAAAAATCTGAACAGCCTTTGACTCAAGA 126992 ||||| |||||||||||||| || || || | ||| ||||||| || | | ||| || Sbjct 1389 GCCCAATCTTTTTCTTGTTCTGCTGCTTCAACAAACATCTGAATTGCTTCT---TCACGA 1333 Query 126993 CGTTTAGCAATATCAA---CCATTTCTGGGTCATCTTCGCCGTTTTGCCAAGTGCG-AAT 127048 | | || | | | ||||||||||||| |||| || | |||| | || || Sbjct 1332 CACTGTGCTGCAACGATTGCCATTTCTGGGTCGTCTTTACCTTCTTGCATAATGTTCAAG 1273 Query 127049 TTGATACTGGGTGCCTTTGAGGTGCAATTGTTCATCACGCGCAATCAGTTTCATGATCTT 127108 || | ||| ||||| | ||| || ||||||||| || || || || ||||| || Sbjct 1272 ATG-TGCTGTGTGCCAGATAAGTGTAACGCTTCATCACGGGCGATTAGCTTGATGATTTT 1214 Query 127109 AGCGTTGCCTTCCATCAAACCGCGTTCGGCAAACGAGAAGGTGCAGGCGAAGCTTACATA 127168 || || ||||||||||| | || || || || | || | || || ||||||||||| Sbjct 1213 TGCATTACCTTCCATCAATTCACGCTCAGCGAAAGCAAATGAACAAGCAAAGCTTACATA 1154 Query 127169 AAAACGAATCGCTTCCAAAGCGTTTACCG 127197 |||||||||||||| || ||| |||| Sbjct 1153 GAAACGAATCGCTTCTAAGATGTTAACCG 1125 >seq15784 Length=38140 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 193686 GAAGCGGGAGGTGGATTTGAACCACCGACCTTTAGCTTATGAGGCTAACGAGATTCCAGA 193745 || ||||||| ||||||||||||| |||||||||| ||||||| |||||||| | ||||| Sbjct 36249 GATGCGGGAGCTGGATTTGAACCAACGACCTTTAGGTTATGAGCCTAACGAGCTACCAGA 36308 Query 193746 CTTCTCCATCCCGC 193759 || ||||||||||| Sbjct 36309 CTGCTCCATCCCGC 36322 >seq7 Length=747525 Score = 93.3 bits (102), Expect = 6e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 191858 TGTTTGGTGCGCCGTGATGGACTCGAACCATCGACCCTCGGATTAAAAGTCCGATGCTCT 191917 ||||||||| | | ||||||| |||||||||||||| ||||||||||||||| |||||| Sbjct 152136 TGTTTGGTGGGTCATGATGGATTCGAACCATCGACCAACGGATTAAAAGTCCGCTGCTCT 152195 Query 191918 ACCAACTAAGCTAA 191931 |||| || |||||| Sbjct 152196 ACCAGCTGAGCTAA 152209 Score = 87.8 bits (96), Expect = 3e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 191861 TTGGTGCGCCGTGATGGACTCGAACCATCGACCCTCGGATTAAAAGTCCGATGCTCTACC 191920 |||||| | | ||||||| |||||||||||||| ||||||||||||||| ||||||||| Sbjct 152343 TTGGTGGGTCATGATGGATTCGAACCATCGACCAACGGATTAAAAGTCCGCTGCTCTACC 152402 Query 191921 AACTAAGCTAA 191931 | || |||||| Sbjct 152403 AGCTGAGCTAA 152413 Score = 86.0 bits (94), Expect = 9e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 191862 TGGTGCGCCGTGATGGACTCGAACCATCGACCCTCGGATTAAAAGTCCGATGCTCTACCA 191921 ||||| | | ||||||| |||||||||||||| ||||||||||||||| |||||||||| Sbjct 152240 TGGTGGGTCATGATGGATTCGAACCATCGACCAACGGATTAAAAGTCCGCTGCTCTACCA 152299 Query 191922 ACTAAGCTAA 191931 || |||||| Sbjct 152300 GCTGAGCTAA 152309 >seq4 Length=924746 Score = 89.7 bits (98), Expect = 7e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 191857 TTGTTTGGTGCGCCGTGATGGACTCGAACCATCGACCCTCGGATTAAAAGTCCGATGCTC 191916 || ||||||| ||||||| ||| ||||||| |||||| ||||||| ||||| ||||| Sbjct 715797 TTATTTGGTGGGCCGTGAAGGATTCGAACCTTCGACCAATGGATTAAGAGTCCACTGCTC 715738 Query 191917 TACCAACTAAGCTAACGGCGCG 191938 |||||||| |||||||||| || Sbjct 715737 TACCAACTGAGCTAACGGCCCG 715716 >seq14 Length=669857 Score = 87.8 bits (96), Expect = 3e-12 Identities = 74/90 (82%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 189961 TCTGGTGCGGATGGTCGGACTCGAACCGACACGCCTAT-GGCGCTAGAACCTAAATCTAG 190019 |||||||||| ||| ||||| ||||| ||||||| ||||| ||||||||||| | Sbjct 166065 TCTGGTGCGGGTGGAGGGACTTGAACCCCCACGCCTTGCGGCGCCGGAACCTAAATCCGG 166006 Query 190020 TGCGTCTGCCAATTTCGCCACATCCGCGTT 190049 |||||||||||||| ||||||| |||| || Sbjct 166005 TGCGTCTGCCAATTCCGCCACACCCGCTTT 165976 >seq26 Length=549101 Score = 86.0 bits (94), Expect = 9e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 194703 TGGTGGGCCCGGTCAGGATCGAACTGACGACACCCGGATTTTCAATCCGGTGCTCTACCA 194762 |||||| | || ||| ||||||||| |||||| ||||||||||||||| |||||||||| Sbjct 258564 TGGTGGCCGAGGGCAGAATCGAACTGCCGACACGCGGATTTTCAATCCGCTGCTCTACCA 258623 Query 194763 TCTGAGCTAC 194772 ||||||||| Sbjct 258624 ACTGAGCTAC 258633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 719105832247680